title: Transiently expressed pattern during myogenesis and candidate miRNAs of Tmem8C in goose.
abstract: Transmembrane protein 8C (Tmem8C) is a muscle-specific membrane protein that controls myoblast fusion, which is essential for the formation of multinucleated muscle fibres. As most of the birds can fly, they have enormous requirement for the muscle, but there are only a few studies of Tmem8C in birds. In this study, we obtained the coding sequence (CDS) of Tmem8C in goose, predicted miRNAs that can act on the 3'UTR, analysed expression profiles of this gene in breast and leg muscles (BM and LM) during the embryonic period and neonatal stages, and identified miRNAs that might affect the targeted gene. The results revealed a high homology between Tmem8C in goose and other animals (indicated by sequence comparisons and phylogenetic trees), some conservative characteristics (e.g., six transmembrane domains and two E-boxes in the 5'UTR might be the potential binding sites of muscle regulatory factors (MRFs)), and the dN/dSratio indicated purifying selection acting on this gene, facilitating conservatism in vertebrates. Q-PCR indicated Tmem8C had a peak expression pattern, reaching its highest expression levels in stage E15 in LM and E19 in BM, and then dropping transiently in E23 (P < 0.05). We examined 13 candidate miRNAs, and negative relationships were detected both in BM and LM (mir-125b-5p, mir-15a, mir-16-1 and mir-n23). Notably, mir-16-1 significantly decreased luciferase activity in dual luciferase reporter gene (LRG) assay, suggesting that it can be identified as potential factors affecting Tmem8C. This study investigated Tmem8C in water bird for the first time, and provided useful information about this gene and its candidate miRNAs in goose.
authors.affiliation: College of Animal Science and Technology, Zhejiang A&F University, Lin'an, Zhejiang Province, People's Republic of China. zay503@zafu.edu.cn.
authors.forename: Ke
authors.initials: K
authors.lastname: He
authors.forename: Ting
authors.initials: T
authors.lastname: Ren
authors.forename: Songhui
authors.initials: S
authors.lastname: Zhu
authors.forename: Shiri
authors.initials: S
authors.lastname: Liang
authors.forename: Ayong
authors.initials: A
authors.lastname: Zhao
mesh_terms: D000818:Animals; D002460:Cell Line; D005777:Geese / Q000145:classification / Q000235:genetics*; D020869:Gene Expression Profiling; D005786:Gene Expression Regulation; D018507:Gene Expression Regulation, Developmental; D017930:Genes, Reporter; D057927:Hydrophobic and Hydrophilic Interactions; D035683:MicroRNAs / Q000737:chemistry / Q000235:genetics*; D024510:Muscle Development / Q000235:genetics*; D032446:Myoblasts / Q000378:metabolism; D009690:Nucleic Acid Conformation; D010802:Phylogeny; D034622:RNA Interference; D012333:RNA, Messenger / Q000737:chemistry / Q000235:genetics; D017422:Sequence Analysis, DNA
chemical_list: D035683:MicroRNAs; D012333:RNA, Messenger