title: Quantum chemical calculations of tryptophan → heme electron and excitation energy transfer rates in myoglobin.
abstract: The development of optical multidimensional spectroscopic techniques has opened up new possibilities for the study of biological processes. Recently, ultrafast two-dimensional ultraviolet spectroscopy experiments have determined the rates of tryptophan → heme electron transfer and excitation energy transfer for the two tryptophan residues in myoglobin (Consani et al., Science, 2013, 339, 1586). Here, we show that accurate prediction of these rates can be achieved using Marcus theory in conjunction with time-dependent density functional theory. Key intermediate residues between the donor and acceptor are identified, and in particular the residues Val68 and Ile75 play a critical role in calculations of the electron coupling matrix elements. Our calculations demonstrate how small changes in structure can have a large effect on the rates, and show that the different rates of electron transfer are dictated by the distance between the heme and tryptophan residues, while for excitation energy transfer the orientation of the tryptophan residues relative to the heme is important. © 2017 The Authors. Journal of Computational Chemistry Published by Wiley Periodicals, Inc.
authors.affiliation: School of Chemistry, University of Nottingham, University Park, Nottingham, NG7 2RD, United Kingdom.
authors.forename: Christian J
authors.initials: CJ
authors.lastname: Suess
authors.affiliation: School of Chemistry, University of Nottingham, University Park, Nottingham, NG7 2RD, United Kingdom.
authors.forename: Jonathan D
authors.identifier: 0000-0002-2726-0983
authors.initials: JD
authors.lastname: Hirst
authors.affiliation: School of Chemistry, University of Nottingham, University Park, Nottingham, NG7 2RD, United Kingdom.
authors.forename: Nicholas A
authors.identifier: 0000-0003-1011-6675
authors.initials: NA
authors.lastname: Besley
mesh_terms: D000077318:Density Functional Theory; D004583:Electrons; D004735:Energy Transfer; D006418:Heme / Q000737:chemistry*; D006860:Hydrogen Bonding; D007532:Isoleucine / Q000737:chemistry; D008853:Microscopy / Q000379:methods; D009211:Myoglobin / Q000737:chemistry*; D011487:Protein Conformation; D013056:Spectrophotometry, Ultraviolet / Q000379:methods; D014364:Tryptophan / Q000737:chemistry*; D014633:Valine / Q000737:chemistry
chemical_list: D009211:Myoglobin; D007532:Isoleucine; D006418:Heme; D014364:Tryptophan; D014633:Valine
keywords: TDDFT; electron transfer; excitation energy transfer; myoglobin