title: Toil enables reproducible, open source, big biomedical data analyses.
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: John
authors.initials: J
authors.lastname: Vivian
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: Arjun Arkal
authors.initials: AA
authors.lastname: Rao
authors.affiliation: AMP Lab, University of California Berkeley, Berkeley, California, USA.|UC Berkeley ASPIRE Lab, Berkeley, Berkeley, California, USA.
authors.forename: Frank Austin
authors.initials: FA
authors.lastname: Nothaft
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: Christopher
authors.initials: C
authors.lastname: Ketchum
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: Joel
authors.initials: J
authors.lastname: Armstrong
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: Adam
authors.identifier: 0000-0001-5828-047X
authors.initials: A
authors.lastname: Novak
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: Jacob
authors.initials: J
authors.lastname: Pfeil
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: Jake
authors.initials: J
authors.lastname: Narkizian
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: Alden D
authors.initials: AD
authors.lastname: Deran
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: Audrey
authors.initials: A
authors.lastname: Musselman-Brown
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: Hannes
authors.initials: H
authors.lastname: Schmidt
authors.affiliation: Curoverse, Somerville, Massachusetts, USA.
authors.forename: Peter
authors.initials: P
authors.lastname: Amstutz
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: Brian
authors.initials: B
authors.lastname: Craft
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: Mary
authors.initials: M
authors.lastname: Goldman
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: Kate
authors.initials: K
authors.lastname: Rosenbloom
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: Melissa
authors.initials: M
authors.lastname: Cline
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: Brian
authors.initials: B
authors.lastname: O'Connor
authors.affiliation: Broad Institute of Harvard and Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts, USA.
authors.forename: Megan
authors.initials: M
authors.lastname: Hanna
authors.affiliation: Broad Institute of Harvard and Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts, USA.
authors.forename: Chet
authors.initials: C
authors.lastname: Birger
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: W James
authors.initials: WJ
authors.lastname: Kent
authors.affiliation: AMP Lab, University of California Berkeley, Berkeley, California, USA.|UC Berkeley ASPIRE Lab, Berkeley, Berkeley, California, USA.
authors.forename: David A
authors.initials: DA
authors.lastname: Patterson
authors.affiliation: AMP Lab, University of California Berkeley, Berkeley, California, USA.|UC Berkeley ASPIRE Lab, Berkeley, Berkeley, California, USA.
authors.forename: Anthony D
authors.initials: AD
authors.lastname: Joseph
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: Jingchun
authors.initials: J
authors.lastname: Zhu
authors.affiliation: Curoverse, Somerville, Massachusetts, USA.
authors.forename: Sasha
authors.initials: S
authors.lastname: Zaranek
authors.affiliation: Broad Institute of Harvard and Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts, USA.
authors.forename: Gad
authors.identifier: 0000-0002-0936-0753
authors.initials: G
authors.lastname: Getz
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: David
authors.initials: D
authors.lastname: Haussler
authors.affiliation: Computational Genomics Lab, UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, California, USA.
authors.forename: Benedict
authors.initials: B
authors.lastname: Paten
mesh_terms: D035843:Biomedical Research / Q000295:instrumentation*; D001330:Electronic Data Processing / Q000379:methods*; D006801:Humans; D012984:Software