title: GSM3368763: 5C_XiteE-inv #2; Mus musculus; OTHER
library_construction_protocol:  For Chromosome Conformation Capture (5C and Capture-C) cells were fixed in culture plates and scraped off; For RNA-seq cells were washed once with PBS and lysed in Trizol in the culture plate; For RAP cells were fixed and lysed. 5C libraries were generated based on a custom Illumina-compatible protocol (Nora et al 2017); Capture-C libraries were generated using NEBNext kit; RNA-seq libraries were generated using the TruSeq Stranded mRNA kit (Illumina); RAP libraries were genrated using NEBNext kit. 5C, Capture-C, RNA-seq, RAP
attributes.tag: GEO Accession
attributes.value: GSM3368763