alias: RO_RO4_17_RNA-Seq
title: RNA-seq of gallus gallus: magnum (oviduct)
design: RNA isolated from magnum by High Pure RNA Tissue Kit (Roche). Library preparation and stranded paired end mRNA sequencing  performed in The European Molecular Biology Laboratory (EMBL) on Illumina NextSeq 500 in pool of 20 samples. Sequencing adaptors trimmed by Trim Galore! software , low quality reads (30,30)  removed from both ends by SICKLE. Aligned to the reference genome assembly Gallus_gallus-5.0 (GCA_000002315.3) by STAR software.
identifiers.namespace: SUB3344595
identifiers.id: RO_RO4_17_RNA-Seq