alias: GSM3529112
title: GSM3529112: Vegfa;Shh Control_A; Mus musculus; RNA-Seq
library_construction_protocol: QIAgen RNeasy Mini  100~200 ng total RNA was used to prepare an RNAseq library using an mRNA isolation kit (New England BioLabs, E7490) and a NEBNext Ultra RNA library prep kit (New England BioLabs, E7530S) with a final double (0.65 x -1 x bead volume) size selection step using a SPRIselect reagent kit (Beckman Coulter, B23318). Seventy-six nucleotide pair-end reads were generated for each sample and aligned to the UCSC mm10 reference genome using tophat2 and bowtie2 in R
identifiers.namespace: GEO
identifiers.id: GSM3529112