alias: E-MTAB-1073:AC_B6xSD7_placenta_paternal_prey
title: Pairing of Homologous Regions in the Mouse Genome Is Associated with Transcription but not Imprinting Status
design: Pairing of Homologous Regions in the Mouse Genome Is Associated with Transcription but not Imprinting Status
library_construction_protocol: 3C material was generated using BglII as a restriction enzyme. The bait fragment (Chr7: 150474507-150484686, NCBIM37) encompasses the whole KvDMR1, and was enriched by streptavidin pulldown of a biotinylated primer extension product using primer KvDMR-4C-ext as described in Schoenfelder et al., 2010. The 4-cutter Csp6I was used to cut within the prey region and create uniform ends for adapter ligation. A SNP at Chr7:150474522 (B6: T, SD7: C) was used to discriminate between alleles.
identifiers.namespace: Babraham Institute
identifiers.id: E-MTAB-1073:AC_B6xSD7_placenta_paternal_prey