title: GSM3167525: Postnatal BDE-47, C39; Mus musculus; RNA-Seq
library_construction_protocol: Total RNA was isolated from liver samples using TRIzol reagent (Invitrogen) and quantified using a NanoDrop 1000 instrument (Thermo Fisher Scientific, Wilmington, DE). Samples of RNA isolated from liver tissue with integrity values > 9 were used for library preparation. RS-122-2101-TruSeq® Stranded mRNA LT – SetA kit (Illumina, San-Diego, CA) was used to isolate intact poly(A)+ RNA from 4 µg of total RNA and to construct strand-specific libraries with multiplexing indexes. RNA-seq was performed using NextSeq500 sequencing system (Illumina, San-Diego, CA) in the Genomic Resource Laboratory of the University of Massachusetts – Amherst. cDNA libraries were single-end sequenced in 76 cycles using a NextSeq 500 Kit v2 (FC-404-2005, Illumina, San-Diego, CA) in one multiplex run (3-4 samples per exposure group).
attributes.tag: GEO Accession
attributes.value: GSM3167525