title: E. coli pop R1.9 Rag
design: The library construction and sequencing were performed at the genomics facility at Instituto Gulbenkian de Ciencia (Portugal). Nextera XT kit from Illumina was used for library construction. Briefly, a sample of mice feces was plated on LB agar and allowed to grow till ~1000 isolated colonies were visible. These colonies were then pooled and DNA was extracted for whole genome sequencing in a MiSeq Benchtop Sequence.