title: WGS of uropathogenic Escherichia coli
design: Genomic DNA was purified from 200 l of an overnight culture of each E. coli strain using a MagNA Pure 96 DNA VIRAL kit (Roche Diagnostics). Genomic DNA libraries were prepared using the 5X WGS fragmentation mix (Enzymatics), pooled and sequenced using the Illumina NextSeq500 Mid Output platform (Integragen, Evry, France) to generate 2 x 150 bp paired-end reads.