title: Rotavirus_Nigeria_CG
design: Briefly, the sample was homogenized, centrifuged for 3minutes at 17,000g and filtered using a 0.8 m centrifugal filter. The filtrate was then treated with nucleases and subsequently subjected to RNA extraction, cDNA synthesis and full genome amplification using the WTA2 kit, library preparation using the Nextera XT DNA and Illumina sequencing. Paired end (2x150bp) sequencing was done using the NextSeq platform (Illumina). Trimming and Assembly were done using Trimmomatic and Spades, respectively. DIAMOND was used to annotate the obtained contigs. All software were used with default settings.