metagenome sequencing of human stool sample from caesarean section born neonate (small for gestational age) around day 3 after birth
Whole metagenome shotgun sequencing was performed on libraries prepared from 100 ng DNA on a NextSeq500 (Illumina). Metagenomic sequencing was performed at LCSB sequencing facility. Metagenomic reads were trimmed, human reads were removed and preprocessed reads were assembled using the integrated metaomic pipeline IMP