title: RNA Seq of 5-wk old Sporocysts
design: three sets of data composed on ~100million paired0end reads were run through the European Nucleotide Archive, then run through FastQC, adapter trimmed using Trimmomaticsm mapped to Sm genome using HISAT2, followed by BEDtools to remove snail transcripts aligning to Sm genome from the sporocyst dataset. Datasets were merged into a single .gtf feel using the merge function of SytingTie . Novel lnCRNA and PC transcripts quantified with Salmon