title: GSM4306542: HeLa_NHS_siSCR_Slam-seq_REP2; Homo sapiens; OTHER
library_construction_protocol: RNA was extracted using Trizol per manufactures protocol, with addition of DTT, and protection from light during the procedure to prevent S-S cross-binding. 5 ug of RNA was used for SLAMseq modifications, as described in Herzog et. al. 2017. Briefly, Iodoacetamide (Sigma I1149) was conjugated to 4SU in a 50mM pH 8.0 phosphate buffer in DMSO/Water (1:1), the reaction was quenched with DTT and RNA was reprecipitated using Ethanol and NaOAc. Libraries were prepared using Quantseq 3' mRNA-Seq Library Prep Kit (Lexogen).
attributes.tag: GEO Accession
attributes.value: GSM4306542