title: UPCH_cov0022_Run1
design: Total viral RNA was extracted from nasopharyngeal swab samples using QIAamp Viral RNA Mini Kit (Qiagen), and then reverse-transcribed using the QIAseq SARS-CoV-2 Primer Panel (Qiagen) and Ampliseq cDNA Synthesis kit (Illumina) for different samples. Libraries were prepared with QIAseq FX DNA Library (Qiagen) and sequenced on an Illumina MiSeq instrument with MiSeq Reagent Kits v2 generating paired-end 150bp reads.