title: Nanopore WGS of NA12878 - alignments
design: Unsheared DNA libraries were prepared using the ONT LSK109 ligation library prep and two flow cells were used to generate ~30X genome coverage. To obtain the BAM file, the reads were mapped to the hg38 reference genome (with no alternate contigs) using minimap2 version 2.17-r941 (with -x map-ont -a --secondary=no options) and sorted using samtools v1.9.