title: Capture sequencing of Treponema pallidum subspecies pallidum
design: Libraries were constructed from genomic DNA using the KAPA HyperPrep kit and cleaned with 0.7x AMPure XP beads. The libraries were then enriched for Treponema pallidum subspecies pallidum sequences using a custom myBaits (Arbor Biosciences) oligonucleotide probe set designed against three T. pallidum reference genomes. The resulting libraries were then sequenced on a 2x300bp MiSeq run.