title: RNAseq_mouse
design: Genomic DNA and RNA was extracted from the faecal and gut tissue using sterile Lysing Matrix E bead tubes (MP Biomedicals, Seven Hills, NSW, Australia) and the AllPrep DNA/RNA Mini Kit (Qiagen, Hilden, Germany). Libraries were made with Nugen Universal Prokaryotic RNA-seq with mouse anydeplete module add-in (Tecan, CA, United States).