title: in vivo RNA-Seq of (p)ppGpp0 Bacteroides thetaiotaomicron: cecum, fasted BL57 mice
design: RNA was extracted using PowerMicrobiome/RnEasy kits (Qiagen), TURBO DNased (Invitrogen), rRNA depleted using NEBNext rRNA Depletion Kit for bacteria (NEB), and RNA-seq libraries were prepared using Ultra II Directional RNA Library Prep Kit for Illumina (NEB)