title: Next-generation sequencing of Hepatitis delta virus RNA: Blood plasma of chronic hepatitis delta patients
design: We analyzed the ribozyme region of hepatitis delta virus (HDV) genome in two longitudinal samples from chronic hepatitis delta patients. The file RIBO2_S2_L001_R1_001.fastq.gz contains the read 1 of next-generation sequencing experiment, which reads are paired-end with those within the file RIBO2_S2_L001_R2_001.fastq.gz. Together the reads of both files include the sequence between nucleotides 663 and 900 of HDV genome, including primers. All reads obtained from each sample are tagged with a multiplex identifier sequence in the 5' ends: P09_1: CGTAGACTAG, P09_2: TACGAGTATG, P15_1: ATCAGACACG, P15_2: ATATCGCGAG, P17_1: TCTCTATGCG, P17_2: TGATACGTCT, P18_1: CATAGTAGTG, P18_2: CGAGAGATAC, P19_1: TCGCACTAGT, P19_2: TCTAGCGACT, P20_1: TCTATACTAT, P20_2: TGACGTATGT, P21_1: TGTGAGTAGT, P21_2: ACAGTATATA, P22_1: ACGCGATCGA, P22_2: ACTAGCAGTA, P23_1: AGCTCACGTA, P23_2: AGTATACATA, P24_1: AGTCGAGAGA, P24_2: AGTGCTACGA, P25_1: CGATCGTATA, P25_2: CGCAGTACGA