title: MIAPaCa2_1_ATAC
design: Nuclei were harvested and ATAC-seq libraries were prepared according to published methods (Buenrostro et al, Nat Methods 10, 1213-1218, 2013). Libraries were sequenced on an Illumina HiSeq2500 using barcoded multiplexing and a paired-end 42 bp length. Reads were aligned using Bowtie2 to GRCh37 and SE peaks were called using HOMERs (Heinz, S. et al. Mol Cell 38, 576-589, 2010) default settings (-style super, Fold change >4, p-value <0.0001).