Salmonella metagenomics: 10^6 CFU Salmonella-spiked caecal content, enriched overnight in BPW replicate A
DNA extracted with DNeasy PowerSoil Pro Kit (Qiagen). Libraries prepared using the Lucigen NxSeq AmpFREE Low DNA Library Kit (VWR), and sequenced PE150 on an Illumina NovaSeq6000