lcWGS
Libraries were prepared with the NEBNext Ultra II FS DNA Sample Preparation Kit (NEB) and Illumina TruSeq adapters following the manufacturers guidelines. Library quality was initially checked by Tapestation D1000 before samples were pooled, the accuracy of pooling was checked on an Illumina Miseq, before sequencing (150 paired-end) on an Illumina Novaseq 6000 (Illumina, Inc., California) to 5-fold coverage