title: RNA-seq of Zymoseptoria tritici: blastospores after 24 h in water
design: Samples were prepared using the Illumina TruSeq Stranded mRNA kit and sequenced on a HiSeq 2500 generating between 3.3 and 5.2 million reads per sample.  Adapter sequences and low quality bases (<Q22) were removed using cutadapt version 2.5.  Reads before and after trimming were checked for quality using FactQC Version 0.10.1, and for common contaminants using FastQ Screen.