title: NativeRNAseq_ASFV_BA71V_16hpi_1
design: Minimap2 was used to map reads from FASTQ files to the ASFV-BA71V genome (U18466.2) using command minimap2 -ax splice -uf -d -a [genome file].mmi [sample file].fastq > [sample file].sam. The sam files generated were converted to bam format using Samtools view, and sorted using IGVTools in IGV.