title: WGS of Case X: short read sequencing
design: Bacterial genomic DNA was extracted using the Fastprep beadbeater (MPBio) and the QIAamp UCP Pathogen mini kit (Qiagen) following manufacturers instructions. For Illumina sequencing, genomic DNA was sequenced on a MiSEQ platform at the Institute for Research in Immunology and Cancer of the Universit de Montral.