title: GSM8734501: custom_chrY_Fico3_PHP_with_Dox_rep2; Homo sapiens; OTHER
library_construction_protocol: Nascent Strand DNA from exponetially growing cell cultures were isolated, size fractionated and subject to exunuclease digestion as described in Aladjem et al., Science 281, 1005, 1998. and Wang et al., Molecular and Cellular Biology 24:3373-86, 2004. Samples were eluted, and then purified by Monarch PCR & DNA Cleanup Kit (NEBT1030S). 100 ng of samples were used to generate the library. The kits used for the library were NEBNext Ultra II DNA Library Prep Kit for Illumina (NEB, E7805S) and NEBNext Multiplex Oligos for Illumina (Index Primers Set 1 and Set 2) (NEB, E7335S and E7500S). A paired end sequncing was performed for all NS-seq samples.