We report the partial genome sequence for the Coxiella-like endosymbiont strain CLE-Rm assembled from publicly available metagenomics data obtained from the southern cattle tick Rhipicephalus microplus Deutsch strain
The three runs of Illumina HiSeq-1000 (accession SRX1668952, SRX1668960 and SRX1668961) sequencing reads that were generated from low cot and Cot 696 genomic DNA extracted from pooled collection of eggs from the f7, f10, f11 and f12 generation of the Rhipicephalus microplus Deutsch strain, along with the two runs of 454 GS FLX (accession SRX019998 and SRX019999) sequencing reads from the same Deutsch strain were used for assembling our partial Coxiella-like endosymbiont (CLE-Rm) genome. The raw sequence reads of R. microplus generated from Illumina and 454 sequencing platforms by Centre for Comparative Genomics, Murdoch University, Australia were submitted to SRA/NCBI as BioProjects with accessions PRJNA312025 (Biosample# SAMN04492774; WGS# LYUQ00000000) for illumina HiSeq-1000 reads, and, PRJNA46685 (Biosample# SAMN02953771; WGS# ADMZ00000000) for 454 GS FLX reads.  We are only submitting mapped SRA reads to the  Coxiella-like endosymbiont genome assembled from the aforementioned existing publicly available SRA metagenomics sequence data.