Illumina MiSeq sequencing; qiita_ptid_1648:10360.YUN1242.2
samples of soil from 2 transects in the Atacama desert
Illumina MiSeq 515f, 806rbc amplification of 16SrRNA V4
ampliconconcentration
0.54
averagesoilrelativehumidity
20.9
averagesoiltemperature
23.61
barcode
ACTCGGCCAACT
center_name
NAU
center_project_name
Atacama
collection_timestamp
03/06/2012
depth
0.02
description
sample from Yungay transect
dna_extracted
True
electrical_conductivity
1.845
electrical_conductivity_units
dSiemens per m
elevation
1242
emp_status
EMP_processed
env_biome
desert biome
env_feature
slope
env_material
soil
env_package
soil
experiment_title
Atacama soil transects
extractconcen
0.023
extractgroupno
B
geo_loc_name
Peru:Atacama desert
host_subject_id
YUN1242
host_taxid
410658
latitude
-24.14112
linker
GT
longitude
-70.31242
pcr_primers
FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT
percentcover
0.0
percentrelativehumiditysoil_100
0
ph
9
ph_meth
electrode
physical_specimen_location
NAU
physical_specimen_remaining
True
primer
GTGTGCCAGCMGCCGCGGTAA
project_name
Atacama Desert Soils
public
True
relativehumiditysoilhigh
36.46
relativehumiditysoillow
16.96
required_sample_info_status
completed
run_center
Argonne
run_date
6/1/15
run_prefix
Undetermined_S0_L001
samp_size
0.1,g
sample_type
soil
scientific_name
soil metagenome
sequencereads
28
sequencing_meth
sequencing by synthesis
site_name
YUN1242
soil_organic_carbon
194
soil_organic_carbon_units
mg carbon per gram of soil
target_gene
16S rRNA
target_subfragment
V4
taxon_id
410658
temperaturesoilhigh
27.62
temperaturesoillow
18.33
title
Atacama soil transects
transectid
Yungay
vegetation
False