WGS of Homo Sapien: polyp (villous histology; low grade dysplasia) tissue: Sample A09_10008006
"For library construction, total DNA was quantified in triplicate using the Quant-iT(tm) PicoGreen(R) DNA Assay Kit and normalized to 2ng/uL concentration.  An aliquot of each sample was used for library preparation utilizing the Broad Institute developed one-well protocol. All biochemistry occurs in a single well without the need for sample transfer (the sample is reversibly immobilized to and released from magnetic beads, allowing washes and reagent addition). The product provides one library (typical median insert size of library is 330bp). Samples were sequenced on the Illumina HiSeq Xten instruments producing 150 base pair, paired-end reads to meet 30x mean coverage.  "
alignment_software
Picard Informatics Pipeline