GT_RawGenomeReads_200pm
genome assembling involved four principal steps that progressed from sequence quality revisions, to forming contigs from these sequence reads, to connecting contigs into scaffolds using paired-end sequence of large fragments (jumping libraries), and finally gap filling.  Illumina HiSeq sequences genome coverage was ~95X (fragments, 3 and 8kb spanning inserts) based on a genome size estimate of 1.2Gb.