Illumina MiSeq sequencing; qiita_ptid_1648:10360.YUN3184.1
samples of soil from 2 transects in the Atacama desert
Illumina MiSeq 515f, 806rbc amplification of 16SrRNA V4
ampliconconcentration
1.18
averagesoilrelativehumidity
26.97
averagesoiltemperature
14.12
barcode
CACGAGCTACTC
center_name
NAU
center_project_name
Atacama
collection_timestamp
03/12/2012
depth
0.02
description
sample from Yungay transect
dna_extracted
True
electrical_conductivity
2.235
electrical_conductivity_units
dSiemens per m
elevation
3184
emp_status
EMP_processed
env_biome
desert biome
env_feature
slope
env_material
soil
env_package
soil
experiment_title
Atacama soil transects
extractconcen
0.022
extractgroupno
B
geo_loc_name
Peru:Atacama desert
host_subject_id
YUN3184
host_taxid
410658
latitude
-24.22214
linker
GT
longitude
-68.69441
pcr_primers
FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT
percentcover
0.0
percentrelativehumiditysoil_100
0
ph
7.7
ph_meth
electrode
physical_specimen_location
NAU
physical_specimen_remaining
True
primer
GTGTGCCAGCMGCCGCGGTAA
project_name
Atacama Desert Soils
public
True
relativehumiditysoilhigh
46.57
relativehumiditysoillow
15.09
required_sample_info_status
completed
run_center
Argonne
run_date
6/1/15
run_prefix
Undetermined_S0_L001
samp_size
0.1,g
sample_type
soil
scientific_name
soil metagenome
sequencereads
2
sequencing_meth
sequencing by synthesis
site_name
YUN3184
soil_organic_carbon
254
soil_organic_carbon_units
mg carbon per gram of soil
target_gene
16S rRNA
target_subfragment
V4
taxon_id
410658
temperaturesoilhigh
25.21
temperaturesoillow
2.45
title
Atacama soil transects
transectid
Yungay
vegetation
False