GSM4668653: SPi; Paenibacillus riograndensis; RNA-Seq
All the procedures regarding RNA isolation and RNA quality control were done according to Brito et al. (DOI: 10.1186/s12864-017-4235-z). The three replicates of extracted RNA samples of each condition were pooled in equal parts and the pool of total RNA was subsequently used for the preparation of cDNA libraries. For each condition, a whole transcriptome library was prepared. For removal of ribosomal RNA, Ribo-Zero Plus rRNA Depletion Kit (Illumina, San Diego, USA) was used according to manufacturer's recommendations. The preparation of this library and the cDNA sequencing were carried out according to Mentz et al. (DOI: https://doi.org/10.1186/1471-2164-14-714).
GEO Accession
GSM4668653