GSM3145928: mESC [Capture Hi-C]; Mus musculus; Hi-C
Capture Hi-C enriching 45488946-50879849 on chromosome 16 was performed as previously described (Dryden et al., 2014). Hi-C libraries from 25 million cells were constructed with 4 base cutter MboI, and target enrichment was performed using Agilent SureSelect RNA oligo system with custom designed capture probes (50bp RNA targeting Mbo1 fragments containing at least 1 SNP). Capture Hi-C libraries were then sequenced on Illumina NextSeq 550 with 150bp pair end.
GEO Accession
GSM3145928