GSM2563989: Granuloma-associated crypt sort-316; Mus musculus; RNA-Seq
Five wild-type mice were infected with H. polygyrus and six days later 1 mm punch biopsies from granuloma and non-granuloma tissue were taken, pooled by tissue, digested, and sorted for DAPI(lo) CD45(–) EpCAM(+) CD44(+) crypt epithelial cells. Total RNA from sorted cells was prepared using the Qiagen RNeasy Mini kit. RNA quality was assessed using a Bioanalyzer and submitted for downstream processing. Illumina Truseq Stranded mRNA Library Prep Kit
GEO Accession
GSM2563989