Experiment000391
Genomic DNA was extracted from whole blood, as available, or alter- natively from saliva, with the Gentra Puregene Kit (Qiagen) or Oragene Dx (DNA Genotek), respectively. Purified DNA was fragmented by sonication with a Covaris S2 instrument.  Indexed shotgun sequencing libraries were prepared with the KAPA Library Preparation Kit (Kapa Biosystems), following the manufacturers instructions.