Illumina HiSeq 2500 paired end sequencing
Paired-end sequence reads (2 � 125 bp) were generated using the Illumina HiSeq2500 system. FASTQ sequence files were generated using the Illumina Casava pipeline version 1.8.3.  Reads containing adapters and/or PhiX control signal were removed. Low-quality bases were trimmed  using the �Trim sequences� option of Qiagen�s CLC Genomics Workbench version 7.5 or 8.0.
Paired-end sequence reads (2 � 125 bp) were generated using the Illumina HiSeq2500 system. FASTQ sequence files were generated using the Illumina Casava pipeline version 1.8.3.  Reads containing adapters and/or PhiX control signal were removed. Low-quality bases were trimmed  using the �Trim sequences� option of Qiagen�s CLC Genomics Workbench version 7.5 or 8.0.