Illumina HiSeq 2500 paired end sequencing; Single-cell RNA-seq (smartseq2) of mouse T cells during N.Brasiliensis infection, and RORA KO
Single-cell RNA-seq (smartseq2) of mouse T cells during N.Brasiliensis infection, and RORA KO
Tissues were extracted, mashed into single-cell suspension and Miltenyii MACS was used to purify T cells. Where relevant, cells were FACS purified RNA is extracted as part of the smartseq method Library was made by nextera
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E-MTAB-7694:Th nipo_3_280_p
Experimental Factor: organism part
lung
Experimental Factor: genotype
Rora (CD4) knockout
Experimental Factor: infect
Nippostrongylus brasiliensis
Experimental Factor: time
30
Experimental Factor: single cell identifier
Th nipo_3_280