Illumina HiSeq 4000 paired end sequencing; Bulk_RNA_Sequencing
unspecified
Process - Process Core - Process Id
lib104
Library Preparation Protocol - Protocol Core - Protocol Id
bulk_RNA_library_preparation
Library Preparation Protocol - Protocol Core - Protocol Name
bulk_RNA
Library Preparation Protocol - Protocol Core - Protocol Description
Bulk RNA
Library Preparation Protocol - Protocol Core - Document
bulk_RNA_library_preparation.pdf
Library Preparation Protocol - Input Nucleic Acid Molecule
polyA RNA
Library Preparation Protocol - Library Construction Method
Bulk RNA
Library Preparation Protocol - Nucleic Acid Source
bulk cell
Library Preparation Protocol - End Bias
full length
Library Preparation Protocol - Primer
poly-dT
Library Preparation Protocol - Strand
unstranded
Library Preparation Protocol - Library Construction Kit - Retail Name
NEB RNA Ultra II
Library Preparation Protocol - Library Construction Kit - Manufacturer
New England BioLabs
Sequencing Protocol - Protocol Core - Protocol Id
sequencing_protocol_2
Sequencing Protocol - Protocol Core - Document
bulk_RNA_library_preparation.pdf
Sequencing Protocol - Method
Bulk RNA
Sequencing Protocol - Instrument Manufacturer Model
Illumina HiSeq 4000
Sequencing Protocol - Paired End
true
Input Biomaterial - Biomaterial Core - Biomaterial Id
368C24hLngBulkRNA
Input Biomaterial - Biomaterial Core - Biomaterial Name
368C24hLngBulkRNA
Input Biomaterial - Biomaterial Core - Biomaterial Description
24h lung
Input Biomaterial - Biomaterial Core - Ncbi Taxon Id - 0
9606
Input Biomaterial - Collection Time
2018-09
Input Biomaterial - Genus Species - 0
Homo sapiens
Input Biomaterial - Organ
lung
Input Biomaterial - Organ Parts - 0
parenchyma
Input Biomaterial - Organ Parts - 1
lower left lobe
Input Biomaterial - State Of Specimen - Ischemic Temperature
cold
Input Biomaterial - State Of Specimen - Ischemic Time
97200
Input Biomaterial - State Of Specimen - Postmortem Interval
97200
Input Biomaterial - Preservation Storage - Preservation Method
cryopreservation, other
HCA Process UUID
6ef854aa-9236-4878-b0c5-a54eebb73e65
HCA Library Preparation Protocol UUID
7223c67e-489f-4a88-9f28-7153bcc50dea
HCA Sequencing Protocol UUID
6134b254-8414-47db-817a-8cae370178c5
HCA Input Biomaterial UUID
4d620138-6a03-4b68-b65c-dcc5d90aab30
nominal_length
0
nominal_sdev
0