whole genome resequencing of P. aeruginosa
Genomes were paired-end  re-sequenced using the Illumina HiSeq 4000 instrument (Illumina inc., San  Diego, CA, USA) with around 20 coverage for each genome. The initial strains  in this experiments were genomes sequenced. Genomic DNA from different  isolates were all genomes sequenced independently. Reads were 150 bp long,  sequenced in pairs with a mean insert size of 300 bp. For P.  aeruginosa between 83 and 3834 Mb clean data  (1422 Mb on average) were obtained for each individual.