Illumina HiSeq 4000 paired end sequencing; Bulk_RNA_Sequencing
unspecified
Process - Process Core - Process Id
lib93
Library Preparation Protocol - Protocol Core - Protocol Id
bulk_RNA_library_preparation
Library Preparation Protocol - Protocol Core - Protocol Name
bulk_RNA
Library Preparation Protocol - Protocol Core - Protocol Description
Bulk RNA
Library Preparation Protocol - Protocol Core - Document
bulk_RNA_library_preparation.pdf
Library Preparation Protocol - Input Nucleic Acid Molecule
polyA RNA
Library Preparation Protocol - Library Construction Method
Bulk RNA
Library Preparation Protocol - Nucleic Acid Source
bulk cell
Library Preparation Protocol - End Bias
full length
Library Preparation Protocol - Primer
poly-dT
Library Preparation Protocol - Strand
unstranded
Library Preparation Protocol - Library Construction Kit - Retail Name
NEB RNA Ultra II
Library Preparation Protocol - Library Construction Kit - Manufacturer
New England BioLabs
Sequencing Protocol - Protocol Core - Protocol Id
sequencing_protocol_2
Sequencing Protocol - Protocol Core - Document
bulk_RNA_library_preparation.pdf
Sequencing Protocol - Method
Bulk RNA
Sequencing Protocol - Instrument Manufacturer Model
Illumina HiSeq 4000
Sequencing Protocol - Paired End
true
Input Biomaterial - Biomaterial Core - Biomaterial Id
356C12hLngBulkRNA
Input Biomaterial - Biomaterial Core - Biomaterial Name
356C12hLngBulkRNA
Input Biomaterial - Biomaterial Core - Biomaterial Description
12h lung
Input Biomaterial - Biomaterial Core - Ncbi Taxon Id - 0
9606
Input Biomaterial - Collection Time
2018-07
Input Biomaterial - Genus Species - 0
Homo sapiens
Input Biomaterial - Organ
lung
Input Biomaterial - Organ Parts - 0
parenchyma
Input Biomaterial - Organ Parts - 1
lower left lobe
Input Biomaterial - State Of Specimen - Ischemic Temperature
cold
Input Biomaterial - State Of Specimen - Ischemic Time
68400
Input Biomaterial - State Of Specimen - Postmortem Interval
75600
Input Biomaterial - Preservation Storage - Preservation Method
cryopreservation, other
HCA Process UUID
4d207cfc-9e2e-436b-9fb3-0071dad74b44
HCA Library Preparation Protocol UUID
7223c67e-489f-4a88-9f28-7153bcc50dea
HCA Sequencing Protocol UUID
6134b254-8414-47db-817a-8cae370178c5
HCA Input Biomaterial UUID
e48f24d4-326d-464d-858a-6939b7dd40cf
nominal_length
0
nominal_sdev
0