unspecified paired end sequencing; WGS_Sequencing
unspecified
Process - Process Core - Process Id
lib144
Library Preparation Protocol - Protocol Core - Protocol Id
wgs_library_preparation
Library Preparation Protocol - Protocol Core - Protocol Name
wgs
Library Preparation Protocol - Protocol Core - Protocol Description
WGS
Library Preparation Protocol - Protocol Core - Document
wgs_library_preparation.pdf
Library Preparation Protocol - Input Nucleic Acid Molecule
genomic DNA
Library Preparation Protocol - Library Construction Method
WGS
Library Preparation Protocol - Nucleic Acid Source
bulk cell
Library Preparation Protocol - End Bias
full length
Library Preparation Protocol - Strand
unstranded
Library Preparation Protocol - Library Construction Kit - Retail Name
NEB Ultra II
Library Preparation Protocol - Library Construction Kit - Manufacturer
New England BioLabs
Library Preparation Protocol - Nominal Length
450
Sequencing Protocol - Protocol Core - Protocol Id
sequencing_protocol_3
Sequencing Protocol - Protocol Core - Document
wgs_library_preparation.pdf
Sequencing Protocol - Method
Whole genome sequencing
Sequencing Protocol - Instrument Manufacturer Model
Illumina HiSeqX
Sequencing Protocol - Paired End
true
Input Biomaterial - Biomaterial Core - Biomaterial Id
368C-WGS
Input Biomaterial - Biomaterial Core - Biomaterial Name
368C-WGS
Input Biomaterial - Biomaterial Core - Biomaterial Description
Clinic lung
Input Biomaterial - Biomaterial Core - Ncbi Taxon Id - 0
9606
Input Biomaterial - Collection Time
2018-09
Input Biomaterial - Genus Species - 0
Homo sapiens
Input Biomaterial - Organ
lung
Input Biomaterial - Organ Parts - 0
parenchyma
Input Biomaterial - Organ Parts - 1
lower left lobe
Input Biomaterial - State Of Specimen - Ischemic Temperature
cold
Input Biomaterial - Preservation Storage - Preservation Method
cryopreservation, other
HCA Process UUID
adaa97a6-5b9f-4913-bd47-fae12b70e343
HCA Library Preparation Protocol UUID
646066c3-b75b-4502-80c1-d9b157a95097
HCA Sequencing Protocol UUID
b11f0587-0d44-4001-af0a-1dcb98b3aa4d
HCA Input Biomaterial UUID
d0a23be9-2f53-45de-a3af-35ce863b2121
nominal_length
0
nominal_sdev
0