Illumina Paired End Exome Sequencing of Sample MPNST4 for study "Low mutation burden and frequent loss of CDKN2A/B and SMARCA2, but not PRC2 in type 1-associated atypical neurofibromas"
Illumina paired-end sequencing of sample MPNST4.  Genomic DNA was fragmented by nebulization to ~258 bp fragments, then exomic regions were captured using the Illumina TruSeq version 1 capture kit.
alignment_software
CASAVA-1.8.0,CASAVA-1.8.2