Illumina HiSeq 2000 sequencing; qiita_ptid_77:678.seasonal.insitu.sample.555
Samples taken from surface sediments and sediment from the burrow walls of Upogebia deltaura, a bioturbating shrimp species. Sediments were subjected to 5 different pH levels over a 14-week exposure period. Bacterial and archaeal 16S genes were sequenced.
EMP V4 515f,806rbc protocol
barcode
AGTGTCGATTCG
center_name
Plymouth Marine Laboratory
center_project_name
Investigation into the effects of ocean acidification on microbial communities in bioturbated coastal sediments
emp_status
EMP
illumina_technology
HiSeq
linker
GT
orig_sample_name
555
pcr_primers
FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT
primer
GTGTGCCAGCMGCCGCGGTAA
run_center
ANL
run_date
11/3/10
run_prefix
Bonnie-Pool-and-1percentPhiX_110310_HWUSI-EAS552R_0357_s_5_1_sequence
samp_size
.1,g
sample_center
ANL
sequencing_meth
sequencing by synthesis
study_center
CCME
target_gene
16S rRNA
target_subfragment
V4