Agilent SureSelect Human All Exon V4 Homo sapiens: Whole Blood: Sample AA2273B
"The sequencing libraries were prepared and captured using SureSelect Human All Exon V4 kit (Agilent Technologies) following the manufacturer's instructions. Sequencing was performed using the Illumina HiSeq 2000 system, generating 100bp paired-end reads. All raw 100bp paired-end reads were aligned to the human genome reference sequence (hg19) using BWA v0.5.9-r16 with default parameters for paired-end reads except for seed length set to 35. Aligned reads were realigned using GATK's IndelRealigner v 1.6-5-g557da77 combining all reads from the same patients and subsequently splitting them."
alignment_software
bwa