Global Functional Targets of the Histone Methyltransferase SDG8 Uncover a Role for Histone Modification in Energy Metabolism
This experiment profiles the H3K36me3 and H3K4me3 patterns of 3-week-old wild type plants and sdg8-5 mutant plants in a carbon(C) and light(L) treatment. Each run represents different genotype, treatments, pulldown and biological replicates as follows:    SRR1635352=WT_mCmL_H3K36_rep1;  SRR1635390=WT_mCmL_inputDNA_rep1;  SRR1635391=sdg8_mCmL_H3K36_rep1;  SRR1635487=sdg8_mCmL_H3K4_rep1;  SRR1635488=sdg8_mCmL_inputDNA_rep1;  SRR1635489=WT_pCpL_H3K4_rep1;  SRR1635490=WT_pCpL_H3K36_rep1;  SRR1635513=WT_pCpL_inputDNA_rep1;  SRR1635636=sdg8_pCpL_H3K4_rep1;  SRR1635669=sdg8_pCpL_H3K36_rep1;  SRR1635673=sdg8_pCpL_inputDNA_rep1;  SRR1635718=WT_mCmL_H3K4_rep1;  SRR1635829=WT_mCmL_H3K36_rep2;  SRR1635837=WT_mCmL_H3K4_rep2;  SRR1635838=WT_pCpL_H3K36_rep2;  SRR1635839=WT_pCpL_H3K4_rep2;  SRR1635840=WT_pCpL_inputDNA_rep2;  SRR1635841=WT_mCmL_inputDNA_rep2;  SRR1635842=sdg8_mCmL_H3K36_rep2;  SRR1635843=sdg8_mCmL_H3K4_rep2;  SRR1635844=sdg8_mCmL_inputDNA_rep2;  SRR1635845=sdg8_pCpL_H3K36_rep2;  SRR1635846=sdg8_pCpL_H3K4_rep2;  SRR1635847=sdg8_pCpL_inputDNA_rep2;       while mCmL = minus carbon minus light; untreated controls  pCpL = plus carbon plus light; carbon and light treated sampels  H3K4 = anti H3K4me3 ChIP-Seq  H3K36 = anti H3K36me3 ChIP-Seq  inputDNA = whole cell extract chromatin  before immuno-precipitation, this serves as background.