Illumina MiSeq sequencing; qiita_ptid_2475:10767.McCall.d14.m34
The goal of this study is to determine changes in the fecal microbiome and metabolome associated with T. cruzi intestinal parasite burden
Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4
barcode
TTAGTTTGTCAC
center_name
UCSDMI
center_project_name
mccall_tc_microbiome_metabolome_feces
extraction_robot
HOWE_KF3
extractionkit_lot
PM16F23
linker
GT
mastermix_lot
443912
orig_name
McCall.d14.m34
pcr_primers
FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT
plating
KS
primer
GTGTGCCAGCMGCCGCGGTAA
primer_date
121216
primer_plate
3
processing_robot
CARMEN
project_name
Laura_Isobel_McCall
run_center
UCSDMI
run_date
1/31/17
run_prefix
McCall_SEED_S1_L001
sample_plate
Laura_Isobel_McCall_Plate_3
sequencing_meth
Sequencing by synthesis
target_gene
16S rRNA
target_subfragment
V4
tm1000_8_tool
108379Z
tm300_8_tool
3076189
tm50_8_tool
409172Z
water_lot
RNBF2734
well_id
G4