Illumina MiSeq sequencing; qiita_ptid_6722:12453.smE6d10.8
Mice were socialy defeated (SD) for 10 days. Mesanteric lymph node (MLN) were collected in theend of SD (D10) or 2 weeks after the end of SD (D24) or 12 Days after fecal transplant (D10p12)
Illumina MiSeq 27f, 338r amplification of 16SrRNA V--V3
barcode
TGGTTGGTTACG
center_name
Faculty of medicine, Bar-Ilan university
center_project_name
social defeat MLN
linker
GT
pcr_primers
FWD:TATGGTAATTGTAGAGTTTGATCMTGGCTCAG; REV:ACTCCTACGGGAGGCAGCATGATGAGTGTGG
primer
ACTCCTACGGGAGGCAGCATGATGAGTGTGG
run_center
Genome center, Faculty of medicine, Sefad, Israel
run_date
2015
run_prefix
MW03
samp_size
MLN
sequencing_meth
Sequencing by synthesis
target_gene
16S rRNA
target_subfragment
V3