"Genotyping-by-sequencing data from sorghum BREAD project, Flowcell_Lane = D1EYBACXX_8"
This sample is a multiplexed barcoded genotyping-by-sequencing library with pooled samples. It was prepared using the method of Elshire et al. (DOI:10.1371/journal.pone.0019379) with ApeKI restriction enzyme, as described in Morris et al. (DOI:10.1073/pnas.1215985110). The key for mapping barcodes to samples (n = 192) is: AGGC,IS39814; AGCATT,IS39815; AATCGTT,IS39819; TCAAGTT,IS39913; ACGTGTA,IS39915; CAAGAAGT,IS40005; AACGTAGA,IS40033; AGCTTGGT,IS40034; GATT,IS40036; CTCCGA,IS40215; CTATGGA,IS40272; GATCATA,IS40306; GATGCAT,IS40307; GTCATGGT,IS40324; CTCACGGA,IS40325; ACAGATGA,IS40329; ACCGT,IS40373; TTGGCA,IS40729; TACGGTA,IS40730; GCATTGA,IS40757; CTAATGT,IS40771; AACAGTGA,IS40791; TAGCGTGT,IS40803; CAGTTGGT,IS40819; CGTCA,IS40822; CCACGT,IS40824; ACTATGT,IS40841; CAGGTAT,IS13553; GTCGATA,IS13554; GTGCAAGA,IS16527; ACGTAAGA,IS22879; TGCAAGAA,IS27246; TCGCA,IS13540; GATGTC,IS23120; CGTGAAT,IS26204; TGCAATA,IS13526; TATACGT,IS25234; CAATAGGA,IS23143; CGTATGGT,IS28024; ACTCGAGA,IS3062; CGCAT,IS3717; TGTTAC,IS6750; TTGCAGA,Blank; ATATCGT,PI571275; GCGTAAT,PI571299; TGCAGTGT,PI571302; GTACGTGT,PI571370; GGAGCTGT,PI571376; TCATAGT,PI585379; CAGTTA,PI585394; AACTTGT,PI585405; AGTCTAT,PI647019; AGCGTTA,PI563194; AGGCTAGA,Btx406; TTCGAAGA,PI563516; CTGAGTGT,PI585573; TTACGAT,PI585577; GCCTAT,PI585578; TGACGTA,PI585579; GTCTGAA,PI585580; ATCCGGA,PI585581; CTAGTGGT,PI585583; AATACGGA,PI585590; GATCAGAA,PI585595; GGCTAGA,PI585602; AGTGGC,PI585607; GCTATAA,PI585608; ATCAGTT,PI585609; TCAGTAT,PI585984; GCTAGTGT,PI585985; TGACTGGT,PI585987; TGCATAGA,PI585989; ACAATGGA,PI585991; TGACCT,PI585992; ATCGTAT,PI586000; CAGTTGA,PI586008; CAATGTT,PI586028; AGTTGGCA,PI586032; GCGGATGT,PI586033; GAACGAAT,PI586034; ACAAGAGT,PI586035; TTGCAC,PI586036; TACTGAT,PI586037; TGTGCAA,PI586038; GTTACGA,PI586039; TCGCAAGT,PI586040; CATTGAGA,PI586041; TTGGCGGA,PI586042; GAACATGA,PI586052; CTAGCT,PI586054; CTTGAGA,PI586107; CGACAGT,PI586109; TGCATAT,PI330184; CGATGTGT,PI330828; GTAACAGA,PI534165; CGCCGCAT,PI552851; CGAA,PI570562; TAGTGC,ATx623; CAGCGTA,Bailey; CTGAATT,Colier7; GTAGAGC,PI152971; ACGTGTGT,PI586167; CGCTTGAA,PI619807; AACGAGTA,PI620416; GTCC,PI152591; GTTCCA,PI152593; AGTTCGA,PI152594; TCGTTAA,PI152611; GACCTAT,PI152615; CAAGTGAA,PI152662; ATCGGTGT,PI152677; CCGACCAT,PI152727; ACAT,PI152730; TGAATC,PI152736; GCTAATT,PI152750; TGATCAT,PI152971; CATTAGT,PI153877; GTTAACGA,PI154844; CCTACCGA,PI154868; TGTCTTAA,PI167093; GCACT,PI239441; CGCCAT,PI267573; ACGCTGA,Blank; CGTCGGA,PI297130; ATTAGCA,PI297171; TCGTGGAT,PI452542; GGACAATA,PI452544; GTATACTA,PI452619; AGCTA,PI452692; ATCGTC,PI453106; TAAGCTT,PI453177; GACTATT,PI453696-dark; GAATCTA,PI453696-light; AGCGATAA,PI455217; AACGGAAT,PI455221-dark; TGTGCAGT,PI455221-light; CAGCT,PI455280; GTCACT,PI455301; CTTAGAT,PI455307; TAGGTCA,PI505717; TGTCATT,PI505735; CCACCAGT,PI506030; TCGATGGT,PI506114; ATGCTGGT,PI506122; TATCTGA,PI570570; CATCGC,PI513898; TGATACA,PI521019; GCAACGT,PI521152; GCCAGAT,PI521280; GGCGTGTA,PI570571; GTTCATTA,PI521290; GCAAGTAA,PI521347; TTCAAGT,PI524475; AGGTCT,PI524691; ACCGAGT,PI526150; ACTTGAT,PI526176; CCAGGTA,PI562730; AAGACAGT,PI562732; GAATCGAA,PI562781; CAGGAATA,PI562897; GAGCAGT,PI562970; CCTGCA,PI562971; GTACTTA,PI562981; TCTGATA,PI562982; TGGCAAC,PI562985; TTGTGCGA,PI562990; CATGGTGT,PI562991; GTCTGGAT,PI562994; TAACGAGA,PI562997; GTACTC,PI562998; ATGTCAA,PI563002; ATAGTCA,PI563006; ATGATCT,PI563020; GAAGACAT,PI563021; TGGCTATT,PI563022; CACCACGT,PI563329; ATACAGGA,PI563330; ACCTGC,PI563331; CACAGGT,PI563332; TAGCCAT,PI563355; CATGTTA,PI570584; TGTCAAGA,PI570588; ACCACCGT,PI570603; TCATTGTA,PI569244; CACAGAGT,PI569264; CTTGAC,PI570373; GGTGGCA,PI570388; AGGAGTC,PI585954; TGTAAGC,PI585961; GCGAGGTT,PI585966; CTATGTAA,PI608957; GGTTCATT,PI570604
Flowcell_Lane = D1EYBACXX_8