"Genotyping-by-sequencing data from sorghum BREAD project, Flowcell_Lane = 633Y5AAXX_4"
This sample is a multiplexed barcoded genotyping-by-sequencing library with pooled samples. It was prepared using the method of Elshire et al. (DOI:10.1371/journal.pone.0019379) with ApeKI restriction enzyme, as described in Morris et al. (DOI:10.1073/pnas.1215985110). The key for mapping barcodes to samples (n = 96) is: GTCGATT,Blank; CGCCTTAT,Blank; TACAT,Blank; TAACGA,Blank; TCTGTGA,Blank; TTCCTGGA,Blank; ACAAA,ICSV745; CCACAA,PB15220; TAATA,Sg_SB_RIL093; GTTGAA,Sg_SB_RIL094; TCGAAGA,Sg_SB_RIL187; TATCGGGA,Sg_SB_RIL188; CTCC,Sg_SB_RIL189; TTCTC,Sg_SB_RIL190; GCTTA,Sg_SB_RIL191; AACGCCT,Sg_SB_RIL192; AGGC,Sg_SB_RIL193; TCGTT,Sg_SB_RIL194; TGGCTA,Sg_SB_RIL195; TGCTGGA,Sg_SB_RIL196; TGCA,Sg_SB_RIL197; AGCCC,Sg_SB_RIL198; CTTCCA,Sg_SB_RIL199; AATATGC,Sg_SB_RIL200; GATC,Sg_SB_RIL201; ACCTAA,Sg_SB_RIL202; ACGTGTT,Sg_SB_RIL203; AACCGAGA,Sg_SB_RIL204; ACTA,Sg_SB_RIL205; GTATT,Sg_SB_RIL206; GAGATA,Sg_SB_RIL207; ACGACTAC,Sg_SB_RIL208; TCAC,Sg_SB_RIL209; ATATGT,Sg_SB_RIL210; ATTAATT,Sg_SB_RIL211; ACAGGGAA,Sg_SB_RIL212; CAGA,Sg_SB_RIL213; CTGTA,Sg_SB_RIL214; ATGCCT,Sg_SB_RIL215; GGTGT,Sg_SB_RIL216; AGGAT,Sg_SB_RIL217; ATCGTA,Sg_SB_RIL218; ATTGGAT,Sg_SB_RIL219; ACGTGGTA,Sg_SB_RIL220; AACT,Sg_SB_RIL221; ACCGT,Sg_SB_RIL222; TATTTTT,Sg_SB_RIL223; TAGCATGC,Sg_SB_RIL224; ATTGA,Sg_SB_RIL225; CATCGT,Sg_SB_RIL226; CATAAGT,Sg_SB_RIL227; CCATGGGT,Sg_SB_RIL228; GCGT,Sg_SB_RIL229; GTAA,Sg_SB_RIL230; CTTGCTT,Sg_SB_RIL231; AGTGGA,Sg_SB_RIL232; CATCT,Sg_SB_RIL233; CGCGGT,Sg_SB_RIL234; CGCTGAT,Sg_SB_RIL235; CGCGGAGA,Sg_SB_RIL236; TGCGA,Sg_SB_RIL237; GGTTGT,Sg_SB_RIL238; ATGAAAC,Sg_SB_RIL239; TAGGCCAT,Sg_SB_RIL240; CCTAC,Sg_SB_RIL241; CTATTA,Sg_SB_RIL242; CGGTAGA,Sg_SB_RIL243; CGTGTGGT,Sg_SB_RIL244; CGAT,Sg_SB_RIL245; CCAGCT,Sg_SB_RIL246; AAAAGTT,Sg_SB_RIL247; TGCAAGGA,Sg_SB_RIL248; GAGGA,Sg_SB_RIL249; GCCAGT,Sg_SB_RIL250; CTACGGA,Sg_SB_RIL251; GCTGTGGA,Sg_SB_RIL252; CGCTT,Sg_SB_RIL253; TTCAGA,Sg_SB_RIL254; GAATTCA,Sg_SB_RIL255; TGGTACGT,Sg_SB_RIL256; GGAAC,Sg_SB_RIL257; GGAAGA,Sg_SB_RIL258; GCGGAAT,Sg_SB_RIL259; GGATTGGT,Sg_SB_RIL260; TCACC,Sg_SB_RIL261; TAGGAA,Sg_SB_RIL262; GAACTTC,Sg_SB_RIL263; TCTCAGTC,Sg_SB_RIL264; GTCAA,Sg_SB_RIL265; GTACTT,Sg_SB_RIL266; TAGCGGA,Sg_SB_RIL267; GTGAGGGT,Sg_SB_RIL268; CTAGC,Sg_SB_RIL269; GCTCTA,Sg_SB_RIL270; GGACCTA,Sg_SB_RIL271; CCGGATAT,Sg_SB_RIL272
Flowcell_Lane = 633Y5AAXX_4