RRBS of mus musculus: bladder urothelium, bladder injected with Schistosoma haematobium eggs given normal water
Genomic DNA digested with MspI, Illumina TruSeq adapters ligated, bisulfite converted x2 (Qiagen), libraries pooled (6 samples per lane, 2 lanes) and amplified with KAPA HotStart HiFi Uracil+ polymerase.  50% of sequencing lane was PhiX for color balancing as sequencing cycles pass through MspI digestion sites.
bisulfite