HSV1 166syn
"Barcoded sequencing libraries for each virus were prepared following the manufacturer's protocol for sequencing of genomic DNA (Illumina TruSeq DNA Sample Prep Kit). Viral nucleocapsid DNA (1-5 _g) was used as the input for library preparation. Five to six libraries were multiplexed per flowcell lane; the DNA fragment size selected for each library was centered at 550 bp. Libraries of HSV-1 H166 and H166Syncytial strains were sequenced on an Illumina MiSeq at Pennsylvania State University, using 300 bp paired-end, version 3 sequencing chemistry. Image analysis and base calling were done under default settings with MiSeq Control Software (MCS) version 2.3.0."
HSV1 strain 166syn library 1