"Genotyping-by-sequencing data from sorghum BREAD project, Flowcell_Lane = 633Y5AAXX_3"
This sample is a multiplexed barcoded genotyping-by-sequencing library with pooled samples. It was prepared using the method of Elshire et al. (DOI:10.1371/journal.pone.0019379) with ApeKI restriction enzyme, as described in Morris et al. (DOI:10.1073/pnas.1215985110). The key for mapping barcodes to samples (n = 96) is: TCTGTGA,Blank; TTCCTGGA,Blank; TACAT,ICSV745; TAACGA,PB15220; CTCC,Sg_SB_RIL095; TTCTC,Sg_SB_RIL096; GCTTA,Sg_SB_RIL097; AACGCCT,Sg_SB_RIL098; AGGC,Sg_SB_RIL099; TCGTT,Sg_SB_RIL100; TGGCTA,Sg_SB_RIL101; TGCTGGA,Sg_SB_RIL102; TGCA,Sg_SB_RIL103; AGCCC,Sg_SB_RIL104; CTTCCA,Sg_SB_RIL105; AATATGC,Sg_SB_RIL106; GATC,Sg_SB_RIL107; ACCTAA,Sg_SB_RIL108; ACGTGTT,Sg_SB_RIL109; AACCGAGA,Sg_SB_RIL110; ACTA,Sg_SB_RIL111; GTATT,Sg_SB_RIL112; GAGATA,Sg_SB_RIL113; ACGACTAC,Sg_SB_RIL114; TCAC,Sg_SB_RIL115; ATATGT,Sg_SB_RIL116; ATTAATT,Sg_SB_RIL117; ACAGGGAA,Sg_SB_RIL118; CAGA,Sg_SB_RIL119; CTGTA,Sg_SB_RIL120; ATGCCT,Sg_SB_RIL121; GGTGT,Sg_SB_RIL122; AGGAT,Sg_SB_RIL123; ATCGTA,Sg_SB_RIL124; ATTGGAT,Sg_SB_RIL125; ACGTGGTA,Sg_SB_RIL126; AACT,Sg_SB_RIL127; ACCGT,Sg_SB_RIL128; TATTTTT,Sg_SB_RIL129; TAGCATGC,Sg_SB_RIL130; ATTGA,Sg_SB_RIL131; CATCGT,Sg_SB_RIL132; CATAAGT,Sg_SB_RIL133; CCATGGGT,Sg_SB_RIL134; GCGT,Sg_SB_RIL135; GTAA,Sg_SB_RIL136; CTTGCTT,Sg_SB_RIL137; AGTGGA,Sg_SB_RIL138; CATCT,Sg_SB_RIL139; CGCGGT,Sg_SB_RIL140; CGCTGAT,Sg_SB_RIL141; CGCGGAGA,Sg_SB_RIL142; TGCGA,Sg_SB_RIL143; GGTTGT,Sg_SB_RIL144; ATGAAAC,Sg_SB_RIL145; TAGGCCAT,Sg_SB_RIL146; CCTAC,Sg_SB_RIL147; CTATTA,Sg_SB_RIL148; CGGTAGA,Sg_SB_RIL149; CGTGTGGT,Sg_SB_RIL150; CGAT,Sg_SB_RIL151; CCAGCT,Sg_SB_RIL152; AAAAGTT,Sg_SB_RIL153; TGCAAGGA,Sg_SB_RIL154; GAGGA,Sg_SB_RIL155; GCCAGT,Sg_SB_RIL156; CTACGGA,Sg_SB_RIL157; GCTGTGGA,Sg_SB_RIL158; CGCTT,Sg_SB_RIL159; TTCAGA,Sg_SB_RIL160; GAATTCA,Sg_SB_RIL161; TGGTACGT,Sg_SB_RIL162; GGAAC,Sg_SB_RIL163; GGAAGA,Sg_SB_RIL164; GCGGAAT,Sg_SB_RIL165; GGATTGGT,Sg_SB_RIL166; TCACC,Sg_SB_RIL167; TAGGAA,Sg_SB_RIL168; GAACTTC,Sg_SB_RIL169; TCTCAGTC,Sg_SB_RIL170; GTCAA,Sg_SB_RIL171; GTACTT,Sg_SB_RIL172; TAGCGGA,Sg_SB_RIL173; GTGAGGGT,Sg_SB_RIL174; CTAGC,Sg_SB_RIL175; GCTCTA,Sg_SB_RIL176; GGACCTA,Sg_SB_RIL177; CCGGATAT,Sg_SB_RIL178; TAATA,Sg_SB_RIL179; GTTGAA,Sg_SB_RIL180; TCGAAGA,Sg_SB_RIL181; TATCGGGA,Sg_SB_RIL182; ACAAA,Sg_SB_RIL183; CCACAA,Sg_SB_RIL184; GTCGATT,Sg_SB_RIL185; CGCCTTAT,Sg_SB_RIL186
Flowcell_Lane = 633Y5AAXX_3