"Genotyping-by-sequencing data from sorghum BREAD project, Flowcell_Lane = D0TGUACXX_2"
This sample is a multiplexed barcoded genotyping-by-sequencing library with pooled samples. It was prepared using the method of Elshire et al. (DOI:10.1371/journal.pone.0019379) with ApeKI restriction enzyme, as described in Morris et al. (DOI:10.1073/pnas.1215985110). The key for mapping barcodes to samples (n = 384) is: GACTC,Blank; GGCTAGA,SF_BTx623_pl1; AGGC,SF_ICSL001; ACCGT,SF_ICSL002; ACGTC,SF_ICSL003; AGCATT,SF_ICSL004; TAGTGC,SF_ICSL005; ACCGCT,SF_ICSL006; GCATCC,SF_ICSL007; AATCGTT,SF_ICSL008; GATT,SF_ICSL009; CGTCA,SF_ICSL010; CGATC,SF_ICSL011; CTCCGA,SF_ICSL012; GTTCCA,SF_ICSL013; GCTCAC,SF_ICSL014; CGTACC,SF_ICSL015; CTATGGA,SF_ICSL016; CGAA,SF_ICSL017; TCGCA,SF_ICSL018; ATGCGT,SF_ICSL019; TTGGCA,SF_ICSL020; TGAATC,SF_ICSL021; CTATGC,SF_ICSL022; ATTCAGT,SF_ICSL023; TACGGTA,SF_ICSL024; GTCC,SF_ICSL025; CGCAT,SF_ICSL026; TCCAGT,SF_ICSL027; CCACGT,SF_ICSL028; CGCCAT,SF_ICSL029; CAGCCT,SF_ICSL030; TATCTGA,SF_ICSL031; ACTATGT,SF_ICSL032; ACAT,SF_ICSL033; GCACT,SF_ICSL034; GCTTGA,SF_ICSL035; GATGTC,SF_ICSL036; ATCGTC,SF_ICSL037; GCCATC,SF_ICSL038; TTCAAGT,SF_ICSL039; CGTGAAT,SF_ICSL040; GCGA,SF_ICSL041; AGCTA,SF_ICSL042; TCCGTA,SF_ICSL043; TGTTAC,SF_ICSL044; GTCACT,SF_ICSL045; CGCTCA,SF_ICSL046; GAGCAGT,SF_ICSL047; TTGCAGA,SF_ICSL048; TGCT,SF_ICSL049; CAGCT,SF_ICSL050; TCGGAT,SF_ICSL051; CAGTTA,SF_ICSL052; CATCGC,SF_ICSL053; ACGCTC,SF_ICSL054; TCTAGGA,SF_ICSL055; AACTTGT,SF_ICSL056; CCTC,SF_ICSL057; TCAGC,SF_ICSL058; GTCTTA,SF_ICSL059; GCCTAT,SF_ICSL060; AGGTCT,SF_ICSL061; CTGATC,SF_ICSL062; ACACGGT,SF_ICSL063; TGACGTA,SF_ICSL064; AACA,SF_ICSL065; CATGC,SF_ICSL066; CGGAGT,SF_ICSL067; AGTGGC,SF_ICSL068; CCTGCA,SF_ICSL069; CCAGTC,SF_ICSL070; GACGTGA,SF_ICSL071; GCTATAA,SF_ICSL072; CTGT,SF_ICSL073; GCTAC,SF_ICSL074; CGTCTA,SF_ICSL075; TGACCT,SF_ICSL076; GTACTC,SF_ICSL077; TACGCC,SF_ICSL078; TCATAGT,SF_ICSL079; ATCGTAT,SF_ICSL080; TAAC,SF_ICSL081; CTGAC,SF_ICSL082; CACGTT,SF_ICSL083; TTGCAC,SF_ICSL084; ACCTGC,SF_ICSL085; CCGTAC,SF_ICSL086; TTACGAT,SF_ICSL087; TACTGAT,SF_ICSL088; CTCGA,SF_ICSL089; GTTAGC,SF_ICSL090; CTAGCT,SF_ICSL091; CTTGAC,SF_ICSL092; TCGACC,SF_ICSL093; CTTGAGA,SF_IS18551_pl1; TCGTTAA,Blank; TCAAGTT,SF_ICSL096; ACGTGTA,SF_ICSL097; CAGCGTA,SF_ICSL098; CTGAATT,SF_ICSL099; GTAGAGC,SF_ICSL100; ACGGCAT,SF_ICSL101; ATACTGC,SF_ICSL102; GCTGGAC,SF_ICSL103; GATCATA,SF_ICSL104; GATGCAT,SF_ICSL105; AGTTCGA,SF_ICSL106; GACCTAT,SF_ICSL108; TTCTTGA,SF_ICSL109; GCGGCTA,SF_ICSL110; GTCATCA,SF_ICSL111; GCATTGA,SF_ICSL112; CTAATGT,SF_ICSL113; GCTAATT,SF_ICSL114; TGATCAT,SF_ICSL115; CATTAGT,SF_ICSL116; GGACCTT,SF_ICSL117; CGTTATA,SF_ICSL118; CAGTGAC,SF_ICSL119; CAGGTAT,SF_ICSL120; GTCGATA,SF_ICSL121; ACGCTGA,SF_ICSL122; CGTCGGA,SF_ICSL123; ATTAGCA,SF_ICSL124; GTGTACA,SF_ICSL125; TTAGACT,SF_ICSL126; GCACACT,SF_ICSL127; TGCAATA,SF_ICSL128; TATACGT,SF_ICSL129; TAAGCTT,SF_ICSL130; GACTATT,SF_ICSL131; GAATCTA,SF_ICSL132; TAGCGGC,SF_ICSL133; AGGTTAC,SF_ICSL134; AAGTCTT,SF_ICSL135; ATATCGT,SF_ICSL136; GCGTAAT,SF_ICSL137; CTTAGAT,SF_ICSL138; TAGGTCA,SF_ICSL139; TGTCATT,SF_ICSL140; CGCTTAA,SF_ICSL141; GGCAACT,SF_ICSL142; TGTATCA,SF_ICSL143; AGTCTAT,SF_ICSL144; AGCGTTA,SF_ICSL145; TGATACA,SF_ICSL146; GCAACGT,SF_ICSL147; GCCAGAT,SF_ICSL148; GATAGCT,SF_ICSL149; TCACCGA,SF_ICSL150; CTGGAAC,SF_ICSL151; GTCTGAA,SF_ICSL152; ATCCGGA,SF_ICSL153; ACCGAGT,SF_ICSL154; ACTTGAT,SF_ICSL155; CCAGGTA,SF_ICSL156; AGAGCCT,SF_ICSL157; AAGGTTC,SF_ICSL158; ATTCGAC,SF_ICSL159; ATCAGTT,SF_ICSL160; TCAGTAT,SF_ICSL161; GTACTTA,SF_ICSL162; TCTGATA,SF_ICSL163; TGGCAAC,SF_ICSL164; TACGAGC,SF_ICSL165; CTAGCAT,SF_ICSL166; CAAGATC,SF_ICSL167; CAGTTGA,SF_ICSL168; CAATGTT,SF_ICSL169; ATGTCAA,SF_ICSL170; ATAGTCA,SF_ICSL171; ATGATCT,SF_ICSL172; TTGACTA,SF_ICSL173; AGCTGCA,SF_ICSL174; TCGCGCA,SF_ICSL175; TGTGCAA,SF_ICSL176; GTTACGA,SF_ICSL177; CACAGGT,SF_ICSL178; TAGCCAT,SF_ICSL179; CATGTTA,SF_ICSL180; CGCCGAT,SF_ICSL181; AGTACTT,SF_ICSL182; AGTGTGC,SF_ICSL183; CGACAGT,SF_ICSL184; TGCATAT,SF_ICSL185; GGTGGCA,SF_ICSL186; AGGAGTC,SF_ICSL187; TGTAAGC,SF_ICSL188; AATTGGC,SF_ICSL189; TAATTGC,SF_ICSL190; GAATTCT,SF_IS18551_pl2; TTGGCGGA,00_C2_F5P_135; TGTCAAGA,0002_F5P_15; GAAGACAT,00C2_F5P_251; ATGCACC,00SB_F5DT; CATTGAGA,01_C2_F5P_263; AATGTCT,02SB_FJT_3; GTGCCAC,04_KANINKO; ACAATGGA,04_SIR_F5T_13_1; TTCGCCA,04_SIRFIT35; GAACGAAT,97_SB_F5DT_150; CAATAGGA,Blank; CGGCTCA,CSM388GIN; CGATGTGT,GRINKAN; GCTGCGGA,HANDONGOU98_B6_F59_84; CATATGC,IS6745; ACAAGAGT,KENINKELA_1; TCGCAAGT,KENINKELA_2; TTGTGCGA,LINA3; GAACATGA,MALISOR92_1; TGCATAGA,NAFARINP6; TGACTGGT,NAGULALS; TCCACGC,NIRTA97_SB_F5DT_79_2; AGTTACT,OOSB_F5DT_5; GCGGATGT,SANGATIUI; GTAACAGA,SARDAWA_9; ATTGATC,SEGNETANA; CGCCGCAT,SF_BTx623_pl3; GATCAGAA,SF_ICSL094; AAGACAGT,SF_ICSL095; ATGACGC,SF_ICSL191; TTCGGAC,SF_ICSL192; ACCGGTC,SF_ICSL193; TATGTAC,SF_ICSL194; CAAGAAGT,SF_ICSL195; AACGTAGA,SF_ICSL196; AGCTTGGT,SF_ICSL197; ACGTGTGT,SF_ICSL198; TATTGCA,SF_ICSL199; GCTTAGC,SF_ICSL200; CGGTAGC,SF_ICSL201; AGACAAGT,SF_ICSL202; GTCATGGT,SF_ICSL203; CTCACGGA,SF_ICSL204; ACAGATGA,SF_ICSL205; CAAGTGAA,SF_ICSL206; GGATATC,SF_ICSL207; ACTGCCA,SF_ICSL208; GCAGTTC,SF_ICSL209; GGCCGAGT,SF_ICSL210; AACAGTGA,SF_ICSL211; TAGCGTGT,SF_ICSL212; CAGTTGGT,SF_ICSL213; GTTAACGA,SF_ICSL214; CCGAGCT,SF_ICSL215; TAGTACT,SF_ICSL216; TATAGTC,SF_ICSL217; AACAAGGT,SF_ICSL218; GTGCAAGA,SF_ICSL219; ACGTAAGA,SF_ICSL220; TGCAAGAA,SF_ICSL221; TCGTGGAT,SF_ICSL222; TTGATAC,SF_ICSL223; GACACTC,SF_ICSL224; ACTCCGC,SF_ICSL225; TAACGAGA,SF_ICSL226; CGTATGGT,SF_ICSL228; ACTCGAGA,SF_ICSL229; AGCGATAA,SF_ICSL230; CACGACT,SF_ICSL231; CGAGTAC,SF_ICSL232; GTATTAC,SF_ICSL233; ATACAGGA,SF_ICSL234; TGCAGTGT,SF_ICSL235; GTACGTGT,SF_ICSL236; GGAGCTGT,SF_ICSL237; CCACCAGT,SF_ICSL238; ATCTAGC,SF_ICSL239; ATATGTC,SF_ICSL240; TGAGCGC,SF_ICSL241; CACAGAGT,SF_ICSL242; AGGCTAGA,SF_ICSL243; TTCGAAGA,SF_ICSL244; CTGAGTGT,SF_ICSL245; GGCGTGTA,SF_ICSL246; TGAATTC,SF_ICSL247; TGGACCT,SF_ICSL248; GAGTCGC,SF_ICSL249; CGGCAGGT,SF_ICSL250; CTAGTGGT,SF_ICSL251; AATACGGA,SF_ICSL252; GCGAGGTT,SF_IS18551_pl3; GGTACAC,TASSA; GCGCGTGA,WALI; GCTAGTGT,WALI_1; TCATGAC,ZARAUDYE; GTTATTC,ZARRABLEN; TACAGGAT,Blank; TGGCTATT,INT_296B; CCTTAGAA,INT_BTx623; TAGCAGTA,INT_IS18551; ACTAGGAA,INT_IS2312; CACCACGT,INT_IS81551; GATCTGGT,INT_J2651_2; AGAACTGA,INT_J2668_12; GTGCGATT,INT_J2680_2; TTAGTCGA,INT_J2699_9; AGATACGA,INT_J2708_3; AGTGGCTT,INT_J2714_3; TCATTGTA,INT_J2726_4; ACCACCGT,INT_J2743_3; CTGAAGAA,INT_J2749_5; GCTGGATT,INT_J2752_7; CCACTGCA,INT_J2767_5; GTTCTAAT,INT_J2771_2; CTAATTGA,INT_J2777_2; CTATGTAA,INT_J2779_4; GACTCAAT,INT_J2785_4; GGTTCATT,INT_J2799_1; TCCGCCAA,INT_J2814_5; CGCTTGAA,INT_J3022; AACGAGTA,INT_J3042; ATATTCGT,INT_J3044; AAGATCGA,INT_J3054; GACTGTGT,INT_J3059; TCCGATAT,INT_J3062; TATGCTGA,INT_J3063; TCTTAGGT,INT_J3065; TCGATGGT,INT_J3066; ATGCTGGT,INT_J3068; TGCGGATT,INT_J3071; TTGCATAT,INT_J3072; GGTTACGT,INT_J3074; AGTCGTGT,INT_J3075; CTGTGGTA,INT_J3081; GCATTGGT,INT_J3082; CGATTAGA,INT_J3085; GTGGCTAT,INT_J3088; AATTCTGT,INT_J3089; CAACGCTT,INT_J3091; GTTCATTA,INT_J3093; GGACAATA,INT_J3097; GTATACTA,INT_J3101; GCAAGTAA,INT_J3103; CTCCTCGA,INT_J3106; ATCTCTGA,INT_J3119; GAACAGTT,INT_J3121; CAGGAATA,INT_J3122; TTACGGTA,INT_J3124; GCTATAGA,INT_J3131; TGCTTAAT,INT_J3134; CATGTATT,INT_J3145; CTAGAGTA,INT_J3147; AAGCGATA,INT_J3154; AGCAGATA,INT_J3158; ATTCAGTT,INT_J3168; AGACTGAA,INT_J3171; AACGGAAT,INT_J3175; GGTACTAT,INT_J3180; CACGCCAT,INT_J3186; GAATCGAA,INT_J3197; AATGACGA,INT_J3200; TGTGCAGT,INT_J3202; TTGACAAT,INT_J3213; GTCTGGAT,INT_J3215; ACAGGATA,INT_J3222; TCGAGATA,INT_J3231; CATAATGA,INT_J3235; AAGCAGAT,INT_J3239; GTCAATAT,INT_J3242; CATGGTGT,INT_J3243; AGAACGAT,INT_J3244; CGGCCGTA,INT_J3268; TACGTTAA,INT_J3271; GTGTCAGT,INT_J3274; ACGATTAA,INT_J3275; ACAGCCTT,INT_J3275; TGAAGCAA,INT_J3276; GCGCGCAT,INT_J3279; GCCTCCGA,INT_J3282; TCGGTTGA,INT_J3283; TTCTTGGA,INT_J3284; CGCAACTT,INT_J3289; CCTACCGA,INT_J3295; CCGCCTAA,INT_J3296; ATCGGTGT,INT_J3307; CCGACCAT,INT_J3308; TGTCTTAA,INT_J3315; TCTGATTA,INT_J3317; CGAAGAAT,INT_J3319; CGGTGATT,INT_J3323; CGCGCCTA,INT_J3324; GACACCTT,INT_Swarna
Flowcell_Lane = D0TGUACXX_2