RNA-Seq of Aspergillus niger: N402
Total RNA was extracted from actively-growing fungal mycelia. Single-end RNA-Seq libraries were prepared with the Illumina TruSeq mRNA stranded (first strand) protocol and sequenced on an Illumina HiSeq 2000 instrument to give 100-base reads. The reads were corrected with Rcorrector, and sequence adaptors and PhiX reads were removed with BBDuk. Then the reads were aligned to the genome of Aspergillus niger NRRL3 with STAR_2.4.0j in two-pass mode.
N402_RNA-Seq