"Genotyping-by-sequencing data from sorghum BREAD project, Flowcell_Lane = D0TFTACXX_5"
This sample is a multiplexed barcoded genotyping-by-sequencing library with pooled samples. It was prepared using the method of Elshire et al. (DOI:10.1371/journal.pone.0019379) with ApeKI restriction enzyme, as described in Morris et al. (DOI:10.1073/pnas.1215985110). The key for mapping barcodes to samples (n = 576) is: GGCTAGA,296B_pl1; GTACTC,Blank; AGGC,BNI_ICSL18001; ACCGT,BNI_ICSL18002; ACGTC,BNI_ICSL18003; AGCATT,BNI_ICSL18004; TAGTGC,BNI_ICSL18005; ACCGCT,BNI_ICSL18006; GCATCC,BNI_ICSL18007; AATCGTT,BNI_ICSL18008; GATT,BNI_ICSL18009; CGTCA,BNI_ICSL18010; CGATC,BNI_ICSL18011; CTCCGA,BNI_ICSL18012; GTTCCA,BNI_ICSL18013; GCTCAC,BNI_ICSL18014; CGTACC,BNI_ICSL18015; CTATGGA,BNI_ICSL18016; CGAA,BNI_ICSL18017; TCGCA,BNI_ICSL18018; ATGCGT,BNI_ICSL18019; TTGGCA,BNI_ICSL18020; TGAATC,BNI_ICSL18021; CTATGC,BNI_ICSL18022; ATTCAGT,BNI_ICSL18023; TACGGTA,BNI_ICSL18024; GTCC,BNI_ICSL18025; CGCAT,BNI_ICSL18026; TCCAGT,BNI_ICSL18027; CCACGT,BNI_ICSL18028; CGCCAT,BNI_ICSL18030; CAGCCT,BNI_ICSL18032; TATCTGA,BNI_ICSL18034; ACTATGT,BNI_ICSL18035; ACAT,BNI_ICSL18036; GCACT,BNI_ICSL18037; GCTTGA,BNI_ICSL18038; GATGTC,BNI_ICSL18039; ATCGTC,BNI_ICSL18041; GCCATC,BNI_ICSL18042; TTCAAGT,BNI_ICSL18043; CGTGAAT,BNI_ICSL18044; GCGA,BNI_ICSL18045; AGCTA,BNI_ICSL18046; TCCGTA,BNI_ICSL18047; TGTTAC,BNI_ICSL18048; GTCACT,BNI_ICSL18049; CGCTCA,BNI_ICSL18050; GAGCAGT,BNI_ICSL18051; TTGCAGA,BNI_ICSL18052; TGCT,BNI_ICSL18053; CAGCT,BNI_ICSL18054; TCGGAT,BNI_ICSL18055; CAGTTA,BNI_ICSL18056; CATCGC,BNI_ICSL18057; ACGCTC,BNI_ICSL18058; TCTAGGA,BNI_ICSL18059; AACTTGT,BNI_ICSL18060; CCTC,BNI_ICSL18061; TCAGC,BNI_ICSL18062; GTCTTA,BNI_ICSL18063; GCCTAT,BNI_ICSL18064; AGGTCT,BNI_ICSL18065; CTGATC,BNI_ICSL18066; ACACGGT,BNI_ICSL18067; TGACGTA,BNI_ICSL18068; AACA,BNI_ICSL18070; CATGC,BNI_ICSL18071; CGGAGT,BNI_ICSL18072; AGTGGC,BNI_ICSL18073; CCTGCA,BNI_ICSL18074; CCAGTC,BNI_ICSL18075; GACGTGA,BNI_ICSL18076; GCTATAA,BNI_ICSL18077; CTGT,BNI_ICSL18078; GCTAC,BNI_ICSL18079; CGTCTA,BNI_ICSL18080; TGACCT,BNI_ICSL18081; TACGCC,BNI_ICSL18082; TCATAGT,BNI_ICSL18083; ATCGTAT,BNI_ICSL18084; TAAC,BNI_ICSL18085; CTGAC,BNI_ICSL18086; CACGTT,BNI_ICSL18090; TTGCAC,BNI_ICSL18091; ACCTGC,BNI_ICSL18092; CCGTAC,BNI_ICSL18093; TTACGAT,BNI_ICSL18095; TACTGAT,BNI_ICSL18096; CTCGA,BNI_ICSL18097; GACTC,BNI_ICSL18098; GTTAGC,BNI_ICSL18099; CTAGCT,BNI_ICSL18100; CTTGAC,BNI_ICSL18101; TCGACC,BNI_ICSL18102; CTTGAGA,PVK801_P23_pl1; TAATTGC,296B_pl2; AGTTCGA,Blank; TCAAGTT,BNI_ICSL18103; ACGTGTA,BNI_ICSL18104; CAGCGTA,BNI_ICSL18105; CTGAATT,BNI_ICSL18106; GTAGAGC,BNI_ICSL18107; ACGGCAT,BNI_ICSL18108; ATACTGC,BNI_ICSL18109; GCTGGAC,BNI_ICSL18110; GATCATA,BNI_ICSL18111; GATGCAT,BNI_ICSL18112; TCGTTAA,BNI_ICSL18113; GACCTAT,BNI_ICSL18114; TTCTTGA,BNI_ICSL18115; GCGGCTA,BNI_ICSL18116; GTCATCA,BNI_ICSL18117; GCATTGA,BNI_ICSL18118; CTAATGT,BNI_ICSL18119; GCTAATT,BNI_ICSL18120; TGATCAT,BNI_ICSL18121; CATTAGT,BNI_ICSL18122; GGACCTT,BNI_ICSL18123; CGTTATA,BNI_ICSL18124; CAGTGAC,BNI_ICSL18126; CAGGTAT,BNI_ICSL18127; GTCGATA,BNI_ICSL18129; ACGCTGA,BNI_ICSL18132; CGTCGGA,BNI_ICSL18133; ATTAGCA,BNI_ICSL18134; GTGTACA,BNI_ICSL18135; TTAGACT,BNI_ICSL18136; GCACACT,BNI_ICSL18137; TGCAATA,BNI_ICSL18139; TATACGT,BNI_ICSL18140; TAAGCTT,BNI_ICSL18142; GACTATT,BNI_ICSL18143; GAATCTA,BNI_ICSL18144; TAGCGGC,BNI_ICSL18146; AGGTTAC,BNI_ICSL18147; AAGTCTT,BNI_ICSL18148; ATATCGT,BNI_ICSL18149; GCGTAAT,BNI_ICSL18150; CTTAGAT,BNI_ICSL18151; TAGGTCA,BNI_ICSL18152; TGTCATT,BNI_ICSL18153; CGCTTAA,BNI_ICSL18154; GGCAACT,BNI_ICSL18155; TGTATCA,BNI_ICSL18157; AGTCTAT,BNI_ICSL18158; AGCGTTA,BNI_ICSL18159; TGATACA,BNI_ICSL18161; GCAACGT,BNI_ICSL18162; GCCAGAT,BNI_ICSL18164; GATAGCT,BNI_ICSL18165; TCACCGA,BNI_ICSL18166; CTGGAAC,BNI_ICSL18167; GTCTGAA,BNI_ICSL18168; ATCCGGA,BNI_ICSL18169; ACCGAGT,BNI_ICSL18170; ACTTGAT,BNI_ICSL18171; CCAGGTA,BNI_ICSL18172; AGAGCCT,BNI_ICSL18173; AAGGTTC,BNI_ICSL18174; ATTCGAC,BNI_ICSL18175; ATCAGTT,BNI_ICSL18176; TCAGTAT,BNI_ICSL18177; GTACTTA,BNI_ICSL18178; TCTGATA,BNI_ICSL18179; TGGCAAC,BNI_ICSL18180; TACGAGC,BNI_ICSL18181; CTAGCAT,BNI_ICSL18182; CAAGATC,BNI_ICSL18183; CAGTTGA,BNI_ICSL18184; CAATGTT,BNI_ICSL18185; ATGTCAA,BNI_ICSL18186; ATAGTCA,BNI_ICSL18187; ATGATCT,BNI_ICSL18188; TTGACTA,BNI_ICSL18189; AGCTGCA,BNI_ICSL18192; TCGCGCA,BNI_ICSL18193; TGTGCAA,BNI_ICSL18194; GTTACGA,BNI_ICSL18195; CACAGGT,BNI_ICSL18196; TAGCCAT,BNI_ICSL18197; CATGTTA,BNI_ICSL18198; CGCCGAT,BNI_ICSL18199; AGTACTT,BNI_ICSL18200; AGTGTGC,BNI_ICSL18201; CGACAGT,BNI_ICSL18202; TGCATAT,BNI_ICSL18203; GGTGGCA,BNI_ICSL18204; AGGAGTC,BNI_ICSL18205; TGTAAGC,BNI_ICSL18206; AATTGGC,BNI_ICSL18207; GAATTCT,PVK801_P23_pl2; AGGC,BNI_ICSL18001; TCAAGTT,BNI_ICSL18103; ATGACGC,Rio_1; CGCTTGAA,Sumac2; GATT,BNI_ICSL18009; GATCATA,BNI_ICSL18111; TATTGCA,Wray_3; ATCGGTGT,Brawley2; CGAA,BNI_ICSL18017; GCATTGA,BNI_ICSL18118; GGATATC,PI297130_3; CCTACCGA,Colier2; GTCC,BNI_ICSL18025; CAGGTAT,BNI_ICSL18127; CCGAGCT,Atlas_2; GGACAATA,Danton; ACAT,BNI_ICSL18036; TGCAATA,BNI_ICSL18139; TTGATAC,PI562730_2; AACGGAAT,Fremont; GCGA,BNI_ICSL18045; ATATCGT,BNI_ICSL18149; CACGACT,PI526150_2; TCGATGGT,Leoti; TGCT,BNI_ICSL18053; AGTCTAT,BNI_ICSL18158; ATCTAGC,Leoti_1; GTTCATTA,Mn1056; CCTC,BNI_ICSL18061; GTCTGAA,BNI_ICSL18168; TGAATTC,Dale_3; GAATCGAA,Mn4466; AACA,BNI_ICSL18070; ATCAGTT,BNI_ICSL18176; CGGCTCA,ConvertedGrassl_4; CATGGTGT,N110; CTGT,BNI_ICSL18078; CAGTTGA,BNI_ICSL18184; GGTACAC,PI533871_2; TGGCTATT,P526905; TAAC,BNI_ICSL18085; TGTGCAA,BNI_ICSL18194; AATGTCT,PI533830_1; ACCACCGT,Rio2; CTCGA,BNI_ICSL18097; CGACAGT,BNI_ICSL18202; TCATGAC,WhtAfr2; CTATGTAA,SucreDm; ACCGT,BNI_ICSL18002; ACGTGTA,BNI_ICSL18104; TTCGGAC,Rio_2; AACGAGTA,Atlas1; CGTCA,BNI_ICSL18010; GATGCAT,BNI_ICSL18112; GCTTAGC,Dale_2; CCGACCAT,BTx631; TCGCA,BNI_ICSL18018; CTAATGT,BNI_ICSL18119; ACTGCCA,M81E_1; TGTCTTAA,Colier3; CGCAT,BNI_ICSL18026; GTCGATA,BNI_ICSL18129; TAGTACT,PI297171_2; GTATACTA,Della1; GCACT,BNI_ICSL18037; TATACGT,BNI_ICSL18140; GACACTC,Wray_2; TGTGCAGT,GaBlueR; AGCTA,BNI_ICSL18046; GCGTAAT,BNI_ICSL18150; CGAGTAC,Top76-6_2; ATGCTGGT,M81E; CAGCT,BNI_ICSL18054; AGCGTTA,BNI_ICSL18159; ATATGTC,PI562730_3; GCAAGTAA,Umbrela; TCAGC,BNI_ICSL18062; ATCCGGA,BNI_ICSL18169; TGGACCT,PI526150_3; CAGGAATA,Mn822; CATGC,BNI_ICSL18071; TCAGTAT,BNI_ICSL18177; CATATGC,UnconvertedGrassl_4; GTCTGGAT,N111; GCTAC,BNI_ICSL18079; CAATGTT,BNI_ICSL18185; TTCGCCA,PI533794_2; CACCACGT,P527045; CTGAC,BNI_ICSL18086; GTTACGA,BNI_ICSL18195; AGTTACT,PI656029_1; TCATTGTA,RxOrng1; GACTC,BNI_ICSL18098; TGCATAT,BNI_ICSL18203; GTGCCAC,WhtAfr3; GGTTCATT,SgrDrp1; ACGTC,BNI_ICSL18003; CAGCGTA,BNI_ICSL18105; ACCGGTC,Rio_3; AAGATCGA,Atlas2; CGATC,BNI_ICSL18011; AGTTCGA,Blank; CGGTAGC,BLANK; CGAAGAAT,BTx623; ATGCGT,BNI_ICSL18019; GCTAATT,BNI_ICSL18120; GCAGTTC,PI505735_2; TCTGATTA,Colier4; TCCAGT,BNI_ICSL18027; ACGCTGA,BNI_ICSL18132; TATAGTC,PI505735_3; ATCTCTGA,Della2; GCTTGA,BNI_ICSL18038; TAAGCTT,BNI_ICSL18142; ACTCCGC,Top76-6_3; AAGCAGAT,HoneyS2; TCCGTA,BNI_ICSL18047; CTTAGAT,BNI_ICSL18151; GTATTAC,PI297130_2; TGCGGATT,Macia; TCGGAT,BNI_ICSL18055; TGATACA,BNI_ICSL18161; TGAGCGC,M81E_3; CTCCTCGA,Mn2812; GTCTTA,BNI_ICSL18063; ACCGAGT,BNI_ICSL18170; GAGTCGC,Atlas_3; GGTACTAT,Mn856; CGGAGT,BNI_ICSL18072; GTACTTA,BNI_ICSL18178; ATTGATC,ConvertedGrassl_5; ACAGGATA,N98; CGTCTA,BNI_ICSL18080; ATGTCAA,BNI_ICSL18186; TCCACGC,PI533755_3; GATCTGGT,Ranchr1; CACGTT,BNI_ICSL18090; CACAGGT,BNI_ICSL18196; GTTATTC,PI533794_3; CTGAAGAA,RxOrng2; GTTAGC,BNI_ICSL18099; GGTGGCA,BNI_ICSL18204; ATGCACC,WhitMam; TCCGCCAA,BLANK; AGCATT,BNI_ICSL18004; CTGAATT,BNI_ICSL18106; TATGTAC,PI267573_1; ATATTCGT,Sumac3; CTCCGA,BNI_ICSL18012; TCGTTAA,BNI_ICSL18113; AGACAAGT,N100_3; CGGTGATT,CAmber1; TTGGCA,BNI_ICSL18020; TGATCAT,BNI_ICSL18121; GGCCGAGT,Brawley_1; TATGCTGA,Tracy; CCACGT,BNI_ICSL18028; CGTCGGA,BNI_ICSL18133; AACAAGGT,N100_2; GAACAGTT,Della3; GATGTC,BNI_ICSL18039; GACTATT,BNI_ICSL18143; TAACGAGA,UnconvertedGrassl_3; ACGATTAA,Iceberg; TGTTAC,BNI_ICSL18048; TAGGTCA,BNI_ICSL18152; ATACAGGA,Brawley_2; GGTTACGT,McLeanS; CAGTTA,BNI_ICSL18056; GCAACGT,BNI_ICSL18162; CACAGAGT,Brawley_3; TTACGGTA,Mn291; GCCTAT,BNI_ICSL18064; ACTTGAT,BNI_ICSL18171; CGGCAGGT,PI506069_3; CACGCCAT,WcAmber; AGTGGC,BNI_ICSL18073; TCTGATA,BNI_ICSL18179; GCGCGTGA,CA_5; TCGAGATA,N99; TGACCT,BNI_ICSL18081; ATAGTCA,BNI_ICSL18187; ACAATGGA,PI576340_4; AGAACTGA,Ranchr2; TTGCAC,BNI_ICSL18091; TAGCCAT,BNI_ICSL18197; ACAAGAGT,PI576340_2; GTTCTAAT,Saccaln; CTAGCT,BNI_ICSL18100; AGGAGTC,BNI_ICSL18205; GAACATGA,WileyRL; CCTTAGAA,SgrDrp3; TAGTGC,BNI_ICSL18005; GTAGAGC,BNI_ICSL18107; CAAGAAGT,PI267573_2; GACTGTGT,Axtel; GTTCCA,BNI_ICSL18013; GACCTAT,BNI_ICSL18114; GTCATGGT,Top76-6_1; CGCGCCTA,Top76; TGAATC,BNI_ICSL18021; CATTAGT,BNI_ICSL18122; AACAGTGA,Cowley_3; TTGCATAT,Colman1; CGCCAT,BNI_ICSL18030; ATTAGCA,BNI_ICSL18134; GTGCAAGA,PI562730_2; GCTATAGA,DkAmber; ATCGTC,BNI_ICSL18041; GAATCTA,BNI_ICSL18144; CAATAGGA,PI508366_2; ACAGCCTT,KColier; GTCACT,BNI_ICSL18049; TGTCATT,BNI_ICSL18153; TGCAGTGT,Cowley_2; CTGTGGTA,McLeanW; CATCGC,BNI_ICSL18057; GCCAGAT,BNI_ICSL18164; AGGCTAGA,ConvertedGrassl_1; TGCTTAAT,Mn3046; AGGTCT,BNI_ICSL18065; CCAGGTA,BNI_ICSL18172; CTAGTGGT,PI510757_3; AATGACGA,N100; CCTGCA,BNI_ICSL18074; TGGCAAC,BNI_ICSL18180; GCTAGTGT,N100_4; AGAACGAT,Orange1; GTACTC,Blank; ATGATCT,BNI_ICSL18188; GCTGCGGA,PI533871_3; GTGCGATT,RedAmbr; ACCTGC,BNI_ICSL18092; CATGTTA,BNI_ICSL18198; TCGCAAGT,PI656029_3; CTAATTGA,Sapling; CTTGAC,BNI_ICSL18101; TGTAAGC,BNI_ICSL18206; CGATGTGT,WileySo; TAGCAGTA,SgrDrp4; ACCGCT,BNI_ICSL18006; ACGGCAT,BNI_ICSL18108; AACGTAGA,PI267573_3; TCCGATAT,TxDblSw; GCTCAC,BNI_ICSL18014; TTCTTGA,BNI_ICSL18115; CTCACGGA,ConvertedGrassl_2; GCCTCCGA,CAmber3; CTATGC,BNI_ICSL18022; GGACCTT,BNI_ICSL18123; TAGCGTGT,PI526150_1; AGTCGTGT,Colman2; CAGCCT,BNI_ICSL18032; GTGTACA,BNI_ICSL18135; ACGTAAGA,Leoti_2; CATGTATT,EFolger; GCCATC,BNI_ICSL18042; TAGCGGC,BNI_ICSL18146; CGTATGGT,CA_1; TGAAGCAA,KOrange; CGCTCA,BNI_ICSL18050; CGCTTAA,BNI_ICSL18154; GTACGTGT,M81E_2; GCATTGGT,MnAmber; ACGCTC,BNI_ICSL18058; GATAGCT,BNI_ICSL18165; TTCGAAGA,PI297171_1; AAGCGATA,Mn3083; CTGATC,BNI_ICSL18066; AGAGCCT,BNI_ICSL18173; AATACGGA,PI508366_4; GTCAATAT,N100R; CCAGTC,BNI_ICSL18075; TACGAGC,BNI_ICSL18181; TGACTGGT,PI656094_2; CGGCCGTA,Orange2; TACGCC,BNI_ICSL18082; TTGACTA,BNI_ICSL18189; GCGGATGT,PI505722_1; TTAGTCGA,RedTopT; CCGTAC,BNI_ICSL18093; CGCCGAT,BNI_ICSL18199; CATTGAGA,PI576340_1; GACTCAAT,Simon; TCGACC,BNI_ICSL18102; AATTGGC,BNI_ICSL18207; GTAACAGA,Wiliams; ACTAGGAA,SgrDrp5; GCATCC,BNI_ICSL18007; ATACTGC,BNI_ICSL18109; AGCTTGGT,PI510757_2; CGCAACTT,Brandes; CGTACC,BNI_ICSL18015; GCGGCTA,BNI_ICSL18116; ACAGATGA,UnconvertedGrassl_1; TCGGTTGA,CnAtlas; ATTCAGT,BNI_ICSL18023; CGTTATA,BNI_ICSL18124; CAGTTGGT,PI508366_3; AATTCTGT,Cowley; TATCTGA,BNI_ICSL18034; TTAGACT,BNI_ICSL18136; TGCAAGAA,Cowley_1; CTAGAGTA,EllisSo; TTCAAGT,BNI_ICSL18043; AGGTTAC,BNI_ICSL18147; ACTCGAGA,Atlas_1; GCGCGCAT,Keller1; GAGCAGT,BNI_ICSL18051; GGCAACT,BNI_ICSL18155; GGAGCTGT,PI506069_2; CGATTAGA,Mn1500; TCTAGGA,BNI_ICSL18059; TCACCGA,BNI_ICSL18166; CTGAGTGT,PI297130_1; ATTCAGTT,Mn410; ACACGGT,BNI_ICSL18067; AAGGTTC,BNI_ICSL18174; GATCAGAA,Wray_4; TTGACAAT,WhtAfr1; GACGTGA,BNI_ICSL18076; CTAGCAT,BNI_ICSL18182; TGCATAGA,PI656029_2; TACGTTAA,Orange3; TCATAGT,BNI_ICSL18083; AGCTGCA,BNI_ICSL18192; GAACGAAT,PI656094_4; AGATACGA,Rex; TTACGAT,BNI_ICSL18095; AGTACTT,BNI_ICSL18200; TTGGCGGA,PI656094_1; GCTGGATT,Smith; GGCTAGA,296B_pl1; TAATTGC,296B_pl2; CGCCGCAT,Wray; GACACCTT,SgrDrp6; AATCGTT,BNI_ICSL18008; GCTGGAC,BNI_ICSL18110; ACGTGTGT,Leoti_3; CCGCCTAA,Brawley1; CTATGGA,BNI_ICSL18016; GTCATCA,BNI_ICSL18117; CAAGTGAA,PI562730_1; TTCTTGGA,Colier1; TACGGTA,BNI_ICSL18024; CAGTGAC,BNI_ICSL18126; GTTAACGA,PI506069_1; CAACGCTT,Dale; ACTATGT,BNI_ICSL18035; GCACACT,BNI_ICSL18137; TCGTGGAT,PI297171_3; AGCAGATA,Folger; CGTGAAT,BNI_ICSL18044; AAGTCTT,BNI_ICSL18148; AGCGATAA,Dale_1; TCTTAGGT,Keller2; TTGCAGA,BNI_ICSL18052; TGTATCA,BNI_ICSL18157; CCACCAGT,PI505735_1; GTGGCTAT,Mn1054; AACTTGT,BNI_ICSL18060; CTGGAAC,BNI_ICSL18167; GGCGTGTA,PI510757_1; AGACTGAA,Mn4125; TGACGTA,BNI_ICSL18068; ATTCGAC,BNI_ICSL18175; AAGACAGT,CA_4; CATAATGA,N109; GCTATAA,BNI_ICSL18077; CAAGATC,BNI_ICSL18183; TTGTGCGA,PI608957_2; GTGTCAGT,PI52606; ATCGTAT,BNI_ICSL18084; TCGCGCA,BNI_ICSL18193; GAAGACAT,PI533755_2; AGTGGCTT,Rio1; TACTGAT,BNI_ICSL18096; AGTGTGC,BNI_ICSL18201; TGTCAAGA,PI533794_1; CCACTGCA,Sorgras; CTTGAGA,PVK801_P23_pl1; GAATTCT,PVK801_P23_pl2; GCGAGGTT,WxAtlas; TACAGGAT,Sumac1
Flowcell_Lane = D0TFTACXX_5