"Genotyping-by-sequencing data from sorghum BREAD project, Flowcell_Lane = D0E1YACXX_5"
This sample is a multiplexed barcoded genotyping-by-sequencing library with pooled samples. It was prepared using the method of Elshire et al. (DOI:10.1371/journal.pone.0019379) with ApeKI restriction enzyme, as described in Morris et al. (DOI:10.1073/pnas.1215985110). The key for mapping barcodes to samples (n = 192) is: GTGCAAGA,Blank; ATGACGC,IS17941; TTCGGAC,IS17980; ACCGGTC,IS18039; TATGTAC,IS19153; CAAGAAGT,IS19262; AACGTAGA,IS19389; AGCTTGGT,IS19445; ACGTGTGT,IS19450; TATTGCA,IS19676; GCTTAGC,IS19859; CGGTAGC,IS19975; AGACAAGT,IS20195; GTCATGGT,IS20298; CTCACGGA,IS20625; ACAGATGA,IS20632; CAAGTGAA,IS20679; GGATATC,IS20697; ACTGCCA,IS20713; GCAGTTC,IS20727; GGCCGAGT,IS20740; AACAGTGA,IS20743; TAGCGTGT,IS20816; CAGTTGGT,IS20956; GTTAACGA,IS21083; CCGAGCT,IS21512; TAGTACT,IS21645; TATAGTC,IS21863; AACAAGGT,IS22239; ACGTAAGA,IS22294; TGCAAGAA,IS22609; TCGTGGAT,IS22616; TTGATAC,IS22720; GACACTC,IS22799; ACTCCGC,IS22986; TAACGAGA,IS23216; CAATAGGA,IS23514; CGTATGGT,IS23521; ACTCGAGA,IS23579; AGCGATAA,IS23586; CACGACT,IS23590; CGAGTAC,IS23644; GTATTAC,IS23684; ATACAGGA,IS23891; TGCAGTGT,IS23992; GTACGTGT,IS24139; GGAGCTGT,IS24175; CCACCAGT,IS24218; ATCTAGC,IS24348; ATATGTC,IS24453; TGAGCGC,IS24462; CACAGAGT,IS24463; AGGCTAGA,IS24492; TTCGAAGA,IS24503; CTGAGTGT,IS24939; GGCGTGTA,IS24953; TGAATTC,IS25089; TGGACCT,IS25249; GAGTCGC,IS25301; CGGCAGGT,IS25548; CTAGTGGT,IS25732; AATACGGA,IS25836; GATCAGAA,IS25910; AAGACAGT,IS25989; CGGCTCA,IS26025; CATATGC,IS26046; ATTGATC,IS26222; GCGCGTGA,IS26484; GCTAGTGT,IS26617; TGACTGGT,IS26694; TGCATAGA,IS26701; TTGTGCGA,IS26737; GGTACAC,IS26749; TTCGCCA,IS27034; TCCACGC,IS27557; ACAATGGA,IS27697; GCTGCGGA,IS27786; GCGGATGT,IS27887; GAACGAAT,IS27912; GAAGACAT,IS28141; AATGTCT,IS28313; AGTTACT,IS28389; GTTATTC,IS28449; ACAAGAGT,IS28451; TCGCAAGT,IS28614; CATTGAGA,IS28747; TTGGCGGA,IS28849; TGTCAAGA,IS29091; TCATGAC,IS29100; GTGCCAC,IS29187; ATGCACC,IS29233; GAACATGA,IS29239; CGATGTGT,IS29241; GTAACAGA,IS29269; CGCCGCAT,IS29304; GCGAGGTT,IS29314; AGACTGAA,Blank; TTGACAAT,IS11067; CATAATGA,IS11954; CATGGTGT,IS11963; GTCTGGAT,IS14130; ACAGGATA,IS14238; TCGAGATA,IS14252; AGAACGAT,IS14264; CGGCCGTA,IS14279; TACGTTAA,IS14297; GTGTCAGT,IS14299; TGGCTATT,IS14357; CACCACGT,IS14467; GATCTGGT,IS14564; AGAACTGA,IS14567; GTGCGATT,IS14719; AAGCGATA,IS18758; TTAGTCGA,IS18799; AGATACGA,IS18810; AGTGGCTT,IS18820; ACCACCGT,IS18821; TCATTGTA,IS18858; CTGAAGAA,IS18908; GTTCTAAT,IS18931; CTAATTGA,IS18948; GACTCAAT,IS20622; GGTACTAT,IS2079; TGCTTAAT,IS2205; GCTGGATT,IS25522; CCACTGCA,IS25523; CTATGTAA,IS25524; GGTTCATT,IS26739; CACGCCAT,IS2752; CGCTTGAA,IS29326; AACGAGTA,IS29335; AAGATCGA,IS29358; ATATTCGT,IS29392; GACTGTGT,IS29441; TCCGATAT,IS29468; CGCAACTT,IS29519; CCGCCTAA,IS29565; ATCGGTGT,IS29568; CCGACCAT,IS29582; CGAAGAAT,IS29606; CGGTGATT,IS29627; CGCGCCTA,IS29654; GCCTCCGA,IS29689; TCGGTTGA,IS29714; TTCTTGGA,IS29733; CCTACCGA,IS29772; TGTCTTAA,IS29914; TCTGATTA,IS29950; TATGCTGA,IS30079; TTGCATAT,IS30092; AGTCGTGT,IS30231; AATTCTGT,IS30383; CAACGCTT,IS30400; GGACAATA,IS30417; GTATACTA,IS30443; ATCTCTGA,IS30450; GAACAGTT,IS30451; GCTATAGA,IS30460; CATGTATT,IS30466; CTAGAGTA,IS30507; AGCAGATA,IS30508; AACGGAAT,IS30533; TGTGCAGT,IS30536; AAGCAGAT,IS30562; ACGATTAA,IS30572; ACAGCCTT,IS30838; TGAAGCAA,IS31043; GCGCGCAT,IS31186; TCTTAGGT,IS31446; TCGATGGT,IS31557; ATGCTGGT,IS31651; TGCGGATT,IS31681; GGTTACGT,IS31706; CTGTGGTA,IS31714; GCATTGGT,IS32245; CGATTAGA,IS32349; GTGGCTAT,IS32439; TCCGCCAA,IS32515; CCTTAGAA,IS32523; TAGCAGTA,IS32754; GTTCATTA,IS32787; GCAAGTAA,IS33023; CTCCTCGA,IS33090; TTACGGTA,IS33353; ATTCAGTT,IS33844; GAATCGAA,IS370; ACTAGGAA,IS41724; GACACCTT,IS41731; TACAGGAT,IS41733; AATGACGA,IS6931; CAGGAATA,IS933; GTCAATAT,IS9712
Flowcell_Lane = D0E1YACXX_5