"Genotyping-by-sequencing data from sorghum BREAD project, Flowcell_Lane = 633Y5AAXX_2"
This sample is a multiplexed barcoded genotyping-by-sequencing library with pooled samples. It was prepared using the method of Elshire et al. (DOI:10.1371/journal.pone.0019379) with ApeKI restriction enzyme, as described in Morris et al. (DOI:10.1073/pnas.1215985110). The key for mapping barcodes to samples (n = 96) is: TCTGTGA,Blank; TTCCTGGA,Blank; TACAT,ICSV745; TAACGA,PB15220; CTCC,Sg_SB_RIL001; TTCTC,Sg_SB_RIL002; GCTTA,Sg_SB_RIL003; AACGCCT,Sg_SB_RIL004; AGGC,Sg_SB_RIL005; TCGTT,Sg_SB_RIL006; TGGCTA,Sg_SB_RIL007; TGCTGGA,Sg_SB_RIL008; TGCA,Sg_SB_RIL009; AGCCC,Sg_SB_RIL010; CTTCCA,Sg_SB_RIL011; AATATGC,Sg_SB_RIL012; GATC,Sg_SB_RIL013; ACCTAA,Sg_SB_RIL014; ACGTGTT,Sg_SB_RIL015; AACCGAGA,Sg_SB_RIL016; ACTA,Sg_SB_RIL017; GTATT,Sg_SB_RIL018; GAGATA,Sg_SB_RIL019; ACGACTAC,Sg_SB_RIL020; TCAC,Sg_SB_RIL021; ATATGT,Sg_SB_RIL022; ATTAATT,Sg_SB_RIL023; ACAGGGAA,Sg_SB_RIL024; CAGA,Sg_SB_RIL025; CTGTA,Sg_SB_RIL026; ATGCCT,Sg_SB_RIL027; GGTGT,Sg_SB_RIL028; AGGAT,Sg_SB_RIL029; ATCGTA,Sg_SB_RIL030; ATTGGAT,Sg_SB_RIL031; ACGTGGTA,Sg_SB_RIL032; AACT,Sg_SB_RIL033; ACCGT,Sg_SB_RIL034; TATTTTT,Sg_SB_RIL035; TAGCATGC,Sg_SB_RIL036; ATTGA,Sg_SB_RIL037; CATCGT,Sg_SB_RIL038; CATAAGT,Sg_SB_RIL039; CCATGGGT,Sg_SB_RIL040; GCGT,Sg_SB_RIL041; GTAA,Sg_SB_RIL042; CTTGCTT,Sg_SB_RIL043; AGTGGA,Sg_SB_RIL044; CATCT,Sg_SB_RIL045; CGCGGT,Sg_SB_RIL046; CGCTGAT,Sg_SB_RIL047; CGCGGAGA,Sg_SB_RIL048; TGCGA,Sg_SB_RIL049; GGTTGT,Sg_SB_RIL050; ATGAAAC,Sg_SB_RIL051; TAGGCCAT,Sg_SB_RIL052; CCTAC,Sg_SB_RIL053; CTATTA,Sg_SB_RIL054; CGGTAGA,Sg_SB_RIL055; CGTGTGGT,Sg_SB_RIL056; CGAT,Sg_SB_RIL057; CCAGCT,Sg_SB_RIL058; AAAAGTT,Sg_SB_RIL059; TGCAAGGA,Sg_SB_RIL060; GAGGA,Sg_SB_RIL061; GCCAGT,Sg_SB_RIL062; CTACGGA,Sg_SB_RIL063; GCTGTGGA,Sg_SB_RIL064; CGCTT,Sg_SB_RIL065; TTCAGA,Sg_SB_RIL066; GAATTCA,Sg_SB_RIL067; TGGTACGT,Sg_SB_RIL068; GGAAC,Sg_SB_RIL069; GGAAGA,Sg_SB_RIL070; GCGGAAT,Sg_SB_RIL071; GGATTGGT,Sg_SB_RIL072; TCACC,Sg_SB_RIL073; TAGGAA,Sg_SB_RIL074; GAACTTC,Sg_SB_RIL075; TCTCAGTC,Sg_SB_RIL076; GTCAA,Sg_SB_RIL077; GTACTT,Sg_SB_RIL078; TAGCGGA,Sg_SB_RIL079; GTGAGGGT,Sg_SB_RIL080; CTAGC,Sg_SB_RIL081; GCTCTA,Sg_SB_RIL082; GGACCTA,Sg_SB_RIL083; CCGGATAT,Sg_SB_RIL084; TAATA,Sg_SB_RIL085; GTTGAA,Sg_SB_RIL086; TCGAAGA,Sg_SB_RIL087; TATCGGGA,Sg_SB_RIL088; ACAAA,Sg_SB_RIL089; CCACAA,Sg_SB_RIL090; GTCGATT,Sg_SB_RIL091; CGCCTTAT,Sg_SB_RIL092
Flowcell_Lane = 633Y5AAXX_2