WGS of sus scrofa: 1 year old female liver: Sample Ellegaard_Minipig
Genomic DNA was isolated using the QIAamp DNA Mini Kit from liver tissue of a 1 year old female Göttingen minipig from Ellegaard. For SOLiD-sequencing of 50 bp single end reads, single fragment libraries were generated from sheared DNA with the fragment library core kit. DNA were used for the construction of a paired-end fragment library with 50 bp forward and 25bp reverse reads and 1–3 kb insert size using the mate-paired library kit. All libraries were amplified by emulsion PCR prior to sequencing. 
alignment_software
BioScope version 1.3