GSM3044585: RNA-seq – 6h 110 mM NaCl (batch 2); Homo sapiens; RNA-Seq
HiC: in situ Hi-C was performed according previously described protocol (Rao et al., 2014) with some modifications (Le Dily et al., 2017). RNA-seq: RNA from control or NaCl-treated T47D cells was extracted at the indicated times using the RNeasy Plus Mini Kit (Invitrogen #74134). HiC: Paired-end libraries were generated with Truseq adaptors (Illumina) according previously published Hi-C protocols (Rao et al., 2014). RNA-seq: stranded polyA selected libraries were prepared using the TruSeq Stranded mRNA Library Prep Kit (Illumina, RS-122-2101) according to the manufacturer's standard protocol.
GEO Accession
GSM3044585