Readmapping submission of sequence captured Chlamydia pneumoniae SH511 strain
Whole genomic DNA extracted from Chlamydia pneumoniae propagated in cell culture. DNA extracted using the Gentra PureGene kit as per manufacturers instructions. DNA capture performed using Agilent Sureselect probes designed to C. pneumoniae strain AR39. Captured DNA sequenced using Illumina HISeq2500. Reads de novo assembled using SPAdes and readmapped using BWA