Relative contribution of ecological differentiated nitrifying communities to autotrophic nitrification in four paddy soils
There are 3 sff files named SIP_fraction_1.sff, SIP_fraction_2.sff and total_DNA_16s.sff. the sample names and barcode in each sff file were listed as below. SIP_fraction_1.sff: JD-13CO2-HF-8 ACGCGA; JD-13CO2-HF-7 ACGCAG; JD-13CO2-HF-6 ACGATA; JD-13CO2-HF-5 CTGATA; JD-13CO2-HF-4 ACGACG; JD-13CO2-HF-3 ACAGCG; JD-12CO2-HF-8 AGCGAC; JD-12CO2-HF-7 AGCATA; JD-12CO2-HF-6 CTACAC; JD-12CO2-HF-5 AGCACG; JD-12CO2-HF-4 AGACGC; JD-12CO2-HF-3 ACTGCG; JD-C2H2-HF-8 ACTATA; JD-C2H2-HF-7 ACGTGC; JD-C2H2-HF-6 ACGTCG; JD-C2H2-HF-5 ACGTAT; JD-C2H2-HF-4 ACGCTG; JD-C2H2-HF-3 ACGCGT; LZ-13CO2-HF-8 CATGCA; LZ-13CO2-HF-7 CATGAT; LZ-13CO2-HF-6 CATGAG; LZ-13CO2-HF-5 CATGAC; LZ-13CO2-HF-4 CATCTG; LZ-13CO2-HF-3 CATCTC; LZ-12CO2-HF-8 CGACTG; LZ-12CO2-HF-7 CGACTC; LZ-12CO2-HF-6 CGACGT; LZ-12CO2-HF-5 CGACGC LZ-12CO2-HF-4 CGACGA; LZ-12CO2-HF-3 CGACAG; LZ-C2H2-HF-8 CGACAC; LZ-C2H2-HF-7 CATGTG; LZ-C2H2-HF-6 CATGTC; LZ-C2H2-HF-5 CATGTA; LZ-C2H2-HF-4 CATGCT; LZ-C2H2-HF-3 CATGCG; JX-13CO2-HF-8 CGTCAG; JX-13CO2-HF-7 CGTCAC; JX-13CO2-HF-6 CTGATG; JX-13CO2-HF-5 CGTAGC; JX-13CO2-HF-4 CGTACG; JX-13CO2-HF-3 CGCTGT; JX-12CO2-HF-8 CTGAGC; JX-12CO2-HF-7 CTGAGA; JX-12CO2-HF-6 CTGACT; JX-12CO2-HF-5 CTACGT; JX-12CO2-HF-4 CTACGA; JX-12CO2-HF-3 CTACAG; JX-C2H2-HF-8 ATCATC; JX-C2H2-HF-7 AGCATG; JX-C2H2-HF-6 AGAGAG; JX-C2H2-HF-5 CTCTGA; JX-C2H2-HF-4 CACGTG; JX-C2H2-HF-3 CGTCTC;JX-13CO2-HF-7 AGTATA;SIP_fraction_2.sff:ZY-13CO2-HF-8 CATGTA; ZY-13CO2-HF-6 CATGCG; ZY-13CO2-HF-5 CATGCA; ZY-13CO2-HF-4 CTCTGA; ZY-13CO2-HF-3 CTCTAG; ZY-12CO2-HF-8 AGCGCA; ZY-12CO2-HF-7 ACTATA; ZY-12CO2-HF-6 CGACGC; ZY-12CO2-HF-5 GACAGC; ZY-12CO2-HF-4 ACGTAT; ZY-12CO2-HF-3 GACACG; ZY-C2H2-HF-8 CGCGTC; ZY-C2H2-HF-7 CGCGTA; ZY-C2H2-HF-6 CGCGAT; ZY-C2H2-HF-5 CACGAT; ZY-C2H2-HF-4 CACATG; ZY-C2H2-HF-3 ATCGCG;total_DNA_16s.sff:ZY-Day0-1 CACTGT; ZY-Day0-2 CAGACG; ZY-Day0-3 CAGACT; ZY-Day56-13CO2-1 CAGAGC; ZY-Day56-13CO2-2 CAGAGT; ZY-Day56-13CO2-3 CAGATC;  ZY-Day56-C2H2-1 CAGATG; ZY-Day56-C2H2-2 CAGCAC; ZY-Day56-C2H2-3 CAGCAG; JD-Day56-C2H2-1 CAGCAT; JD-Day56-C2H2-2 CAGCGA; JD-Day0-1 CAGCGC; JD-Day56-13CO2-1 CAGCGT; JD-Day56-13CO2-2 CAGCTA; JD-Day0-2 CAGTAG;  LZ-Day56-C2H2-1 CAGTCA; LZ-Day56-C2H2-2 CAGTCA; LZ-Day56-13CO2-1 CAGTCT; LZ-Day56-13CO2-2 CAGTGA; LZ-Day0-1 CAGTGT; LZ-Day0-2 CATACG; JX-Day56-C2H2-1 CATCAC; JX-Day56-C2H2-2 CATCAT; JX-Day56-13CO2-1 CTCAGA; JX-Day56-13CO2-2 CTCTAC; JX-Day0-1 CTGCTG; JX-Day0-2 CTGTCG