Deciphering the genome of the Pseudomonas citronellolis type strain DSM50332
Raw paired reads of 250bp were trimmed for adapter sequences and truncated to 240bp, by removing low quality nucleotides from the 3' end. These filtered reads were corrected with BayesHammer from SPAdes 3.9 and used for assembly with SPAdes 3.9 and A5-miseq 20160825. The contigs resulting from both assemblers were improved with Pilon 1.21 and merged with CISA 1.3 to yield the final draft genome.