Illumina MiSeq sequencing; qiita_ptid_8725:12906.P12.Nuts.T1
We characterized the gut microbiota composition and SCFA profile associated with an IgE-mediated FA state. We analyzed fecal samples from 233 IgE-mediated FA patients, and from an age-matched control group (n=58).
Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4
barcode
ATCGTAGTGGTC
center_name
Faculty of medicine, Bar-Ilan university
center_project_name
ok66
linker
cc
pcr_primers
FWD:AATGATACGGCGACCACCGAGATCTACACTATGGTAATTGTGTGCCAGCMGCCGCGGTAA, REV:CAAGCAGAAGACGGCATACGAGATXXXXXXXXXXXXAGTCAGTCAGCCGGACTACHVGGGTWTCTAAT
primer
AATGATACGGCGACCACCGAGATCTACACTATGGTAATTGTGTGCCAGCMGCCGCGGTAA
run_center
genome center, Faculty of medicine, Sefad, Israel
run_date
15/07/2017
run_prefix
ok66_
sequencing_meth
Sequencing by synthesis
target_gene
16S rRNA
target_subfragment
V4