Caridina rubella
Total RNA was isolated from a single Caridina rubella individual collected from Shuga-ga cave on Yamato-ga cave, Miyako-jima island, Ryukyus Archipeligo, Japan. A cDNA library was prepared using a Clontech SMART cDNA Library Construction Kit and sequenced (100 bp PE on 1/5 flowcell lane) on an Illumina HiSeq 2000 by HudsonAlpha Institute for Biotechnology's Genomic Services Lab. A total of 41,610,710 100 bp PE reads were obtained and assembled de novo using Trinity to produce an Caridina rubella transcriptome consisting of 20,216 contigs.