Low coverage genome sequencing of Acropora hyacinthus
We extracted genomic DNA using the Qiagen Allprep system, and prepared samples for sequencing as described by Therkildsen and Palumbi (2017). Paired-end 125 bp Illumina sequencing genome sequencing was carried out across three lanes at the University of Utah Hunstman Cancer Institute; In addition to the 114 A. hyacinthus samples discussed here, 35 other samples of Acropora gemmifera were included in these lanes but are not discussed in the present study. This resulted in an average of 2x coverage for each individual.