GSM6330187: O3-TX-ATAC-seq_1; Homo sapiens; ATAC-seq
RNA samples extracted with Trizon and treated with Dnase I.  ATAC-seq samples derived according to Nextera Tn5 Transposase kits. Hi-C assay was performed to generate a genome-wide interaction as described previously with Arima-HiC Kit (Cat: A410030) (https://arimagenomics.com/). RNA-seq libraries were prepared according to TruSeq Stranded mRNA Library Prep (#20020594).  ATAC-seq libraries were prepared according to Nextera DNA Library Prep Kit (#FC-121-1030). The purified DNA was captured on an Illumina flow cell for cluster generation. Libraries were sequenced on the Genome Analyzer following the manufacturer's protocols.  HiC-seq libraries were prepared according to KAPA HyperPrep Kits (KK8500).