Whole-Genome Illumina Sequencing of [Candida] glabrata: clinical isolate
Shortinsert pairedend libraries were prepared following manufacturer instructions. Whole genome sequencing was performed using a NextSeq 550 sequencing machine. Illumina reads were subjected to quality control (filtering and trimming) using Trimmomatic v0.32. Paired reads were filtered with parameters LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36, allowing the elimination of reads with a PHRED quality score lower than 33 for more than 30% of their lengths.