GSM6340274: lung, 7 days after infection, replicate 1; Mus musculus; RNA-Seq
FACS sorted cells were stained with SytoxTM (Thermofisher Scientific) for dead cell exclusion. 10 000 sorted viable cells per time point were loaded into 10x Genomics Chromium. Library preparation was conducted according to the manufacturer indications (Chromium Next GEM Single Cell 3' GEM, Library & Gel Bead Kit v3.1, 16 rxns PN-1000121).