GSM7925891: Plant leaves, melatonin mitigation of NaCl stress, 10d, rep1; Eriobotrya japonica; RNA-Seq
A 0.5 g sample from each of the treatment and control groups was sent to Noemi Metabolism Ltd. for transcriptome sequencing. Filtered Reads were compared to the reference genome using the upgraded HISAT2 (http://ccb.jhu.edu/software/hisat2/index.shtml ) software for TopHat2. HISAT2 uses an improved BWT algorithm for library construction. Default parameters are used for non-strand-specific libraries, while strand-specific libraries require the library type to be specified (i.e., use --rna-strandness RF for first, --rna-strandness FR for second).