RNA-seq of Trichothecium roseum strain YXFP-22015
The cDNA labraries were constructed and sequenced following standard protocols of BGISEQ platform (for short-read sequencing). the raw reads were filtered by fastp v.0.20.0. The transcripts alignment was generated by STAR v2.7.3 and StringTie v1.3.4. The assemble cDNA alignments and alternative splice variants identification were performed by PASA v2.3.3 and the gene annotation was generated by GeneMarkS-T v5.1. Using EVidenceModeler v1.1.1, 9,102 genes were annotated.