WGS of Phytophthora infestans
Sixteen P. infestans strains were sequenced using Illumina NovaSeq 6000. Raw reads were cleaned with FASTP (v0.20.0), and high-quality reads were aligned to the reference genome Pinf_1306 using Burrows-Wheeler Aligner (v0.7.15). Variants were called using Genome Analysis Toolkit (v3.4-46), and SNPs were annotated with snpEff software (3.6c (build 2014-05-20) based on the reference genome annotations.