RNA-Seq of Lacticaseibacillus paracasei: wild type
Libraries were obtained from 250 ng of RNA by using the Illumina stranded total RNA libraty preparation with Ribo-Zero Plus kit (Illumina). Libraries were sequenced on an NextSeq 500 platform and 2x74 pb pair-end reads generated. Raw sequence reads were checked for quality, adapter trimmed and quality filtered using fastp v0.21  and FastQC v0.11.5 tools. Alignment and quantitation was performed for trimmed data using STAR software ver. 2.7.9a and Htseq v2.03