Whole genome data of Bacillus pseudomycoides
Genomic DNA was sequenced with Illumina NextSeq500 platform with 2 x 150 bp v2 chemistry. The sequenced raw data was processed to obtain high quality clean reads using Trimmomatic v0.38 to remove adapter sequences, ambiguous reads, and low-quality sequences. The high-quality reads of the sample were aligned to the reference genome using BWA MEM (version 0.7.17). The consensus sequence was extracted using Samtools mpileup. The mpileup utility of Samtools (v 0.1.18) was used to identify SNPs and InDels from the sorted BAM file of each of the mapping.