Amplicon sequencing of SARS-COV-2: clinical samples
Sequencing library preparation was performed using the NEBNext ARTIC SARS-CoV-2 FS Library Prep Kit for Illumina according to the standard protocol, with the modification that the ARTIC V4.1 primer panel was used. Sequencing runs were performed on an Illumina Miseq with 300-cycle V2 reagent kits.