snRNA-seq of Mus musculus 4w M Proximal colon
Libraries were sequenced on an Illumina NextSeq 550 (R1: 26 bases; R2: 55 bases). CellRanger v3.0 was used for all initial data pre-processing. Fastq reads were first demultiplexed and then mapped to the reference mm10 transcriptome, augmented to allow for counting of all transcript tags in addition to counting exons as suggested by 10X Genomics.