short-read data of Aedes aegypti
DNA extraction from carcasses using Chemagic360 or Qiagen Dneasy kit. PCR-free library prep protocol. At least 150ng of gDNA from each sample were fragmented to target size between 350 and 400 basepairs. libraries were pooled and sequenced on the Illumina HiSeq 4000 and HiSeqX platforms to generate 2x150 basepair reads.  Reads mapped to the Ae. aegypti L5 genome reference (NCBI WGS Project NIGP01) using BWA mem (v0.7.16) with default parameters, then sorted using samtools sort (1.1), and duplicate reads were marked using Picards markdup function (2.1.0, http://broadinstitute.github.io/picard/). Unmapped reads and their pairs are included in this file.
SUB14714962
Argentina_02