WGS of Salmonella Enteritidis str. SD191
Genomic DNA of SD191 was extracted using the QIAamp DNA Mini Kit (Qiagen, MD, USA). The genome was resolved using Unicycler v0.4.8 hybrid assembly with long reads from PacBio (Pacific Biosciences, CA, USA), referencing S. enterica serovar Enteritidis str. P125109 (GenBank NC_011294). Assembly was proofread with short paired-end reads from Illumina HiSeq X10 (Illumina Inc., CA, USA). Plasmid sequences were identified via PlasFlow software in metagenomic data, annotated using BLAST on PLSDB plasmid database. Analyses were performed on Majorbio Cloud Platform.
SUB14578613
GCA_051904745