The objective of this experiment is to identify and compare the composition of endophytic microbial communities associated with Lilium formosanum. Genomic DNA was extracted from either seeds or leaves of L. formosanum. The resulting libraries were sequenced using the PacBio platform to obtain high-quality, full-length 16S rRNA sequences. Samples were grouped based on tissue typeseeds and leavesto evaluate differences in endophyte composition between these two organs.