Nanopore sequencing of Listeria monocytogenes
Long read sequencing libraries: nanopore ligation sequencing kit (SQK-LSK109) in combination with the native barcodes (EXP-NBD196). Sequenced using a SpotON flow cell (R9.4.1) and a MinION sequencing device. Data acquisition : MinKNOW v3.1.8 software. Base calling: high accuracy mode of the basecaller Guppy 5.0.12+eb1a986