Hybrid Capture Sequencing of Morbillivirus hominis / Measles
Reads were sequenced on Illumina NovaSeq 6000 following Twist viral hybrid-capture enrichment of RNA extracted from clinical specimens. Raw alignments were processed through Quacken extraction-mode pipeline (Bowtie2 against measles dual-genotype reference, MAPQ>=1, identity>=90%, aligned-fraction>=50%) to retain measles-mapping reads only; non-measles reads (including human host) were discarded prior to submission.