Rhizosphere microbiome profiling of Coptis chinensis under different cultivation modes in Chongqing, China
This project generated 16S rRNA gene and ITS amplicon sequencing data from rhizosphere soil of 5-year-old Coptis chinensis cultivated under three cultivation modes (under-forest, high-tunnel, and small-arch tunnel) in Shizhu, Chongqing, China, to characterize bacterial and fungal community shifts associated with cultivation practices.