Toro
For WGS, 2g of genomic DNA was fragmented by focused-ultrasonication and used to make indexed, 350bp, paired-end libraries according to the manufacturers instructions (TruSeq DNA PCR-Free LT Library Preparation Kits A and B, Illumina, Inc., San Diego, California). Pooled, indexed libraries were sequenced with massively parallel sequencing machines (NextSeq2000, Illumina Inc.) and the appropriate kits producing 2150bp paired-end reads.