Shotgun metagenomic data from human stool
DNA extraction, library generation and sequencing were performed by the Lab Core of the Centre for Translational Microbiome Research, at Karolinska Institutet (Stockholm, Sweden). DNA sequencing libraries were prepared using the MGIEasy FS DNA Library Prep Set. Finished libraries were submitted to whole metagenome sequencing on a DNBSEQ-G400 sequencer from Shenzhen MGI Tech Co., Ltd. Libraries, together with microbial community and DNA standards (Zymo Research, Irvine, CA), were sequenced in five batches (extraction plates).