WGS masu salmon of Family 3, individual Oma-3-34
After DNA extraction, samples were sent to the Beijing Genomics Institute (BGI) for library preparation and sequencing. At BGI, short-insert libraries were prepared and sequenced (DNBseq, PE150). After sequencing, reads were filtered at BGI by removing adapter sequences, contamination, and low-quality reads. This was achieved using SOAPnuke (Chen et al. 2018) with the following parameters: -n 0.001 -l 10 - q 0.4 --adaMR 0.25 --ada_trim.