Illumina reads for Acinetobacter baumannii JR01
High-molecular-weight genomic DNA was extracted from Acinetobacter baumannii JR01 using the Quick-DNA HMW MagBead Kit (Zymo Research, USA) according to the manufacturer's instructions. DNA concentration was quantified using a Qubit fluorometer (Thermo Fisher Scientific, Waltham, MA, USA), and DNA integrity was assessed by agarose gel electrophoresis. Sequencing libraries were prepared from 500 ng of genomic DNA using the Illumina DNA Prep kit (Illumina, USA) following the manufacturer's protocol. Libraries were sequenced on the Illumina NovaSeq X Plus platform, generating 2  150 bp paired-end reads. Raw reads were quality-checked and adapter-trimmed using fastp v0.23.4 prior to downstream analysis.